HL_4V7M_239

3D structure

PDB id

4V7M (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structures of Capreomycin bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.45 Å

Loop

Sequence

GUAGGCAAAUCCGC

Length

14 nucleotides

Bulged bases

4V7M|1|DA|A|1490, 4V7M|1|DA|C|1493, 4V7M|1|DA|A|1494, 4V7M|1|DA|U|1497

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7M|1|DA|G|1488
4V7M|1|DA|U|1489
4V7M|1|DA|A|1490
4V7M|1|DA|G|1491
4V7M|1|DA|G|1492
4V7M|1|DA|C|1493
4V7M|1|DA|A|1494
4V7M|1|DA|A|1495
4V7M|1|DA|A|1496
4V7M|1|DA|U|1497
4V7M|1|DA|C|1498
4V7M|1|DA|C|1499
4V7M|1|DA|G|1500
4V7M|1|DA|C|1501

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain DD

50S ribosomal protein L2