HL_4V7P_162
3D structure
- PDB id
- 4V7P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Recognition of the amber stop codon by release factor RF1.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.62 Å
Loop
- Sequence
- CUGGGGCGG
- Length
- 9 nucleotides
- Bulged bases
- 4V7P|1|CA|G|2250
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V7P_162 not in the Motif Atlas
- Homologous match to HL_4WF9_049
- Geometric discrepancy: 0.1311
- The information below is about HL_4WF9_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_85367.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
4V7P|1|CA|C|2248
4V7P|1|CA|U|2249
4V7P|1|CA|G|2250
4V7P|1|CA|G|2251
4V7P|1|CA|G|2252
4V7P|1|CA|G|2253
4V7P|1|CA|C|2254
4V7P|1|CA|G|2255
4V7P|1|CA|G|2256
Current chains
- Chain CA
- 23S ribosomal RNA
Nearby chains
- Chain CM
- 50S ribosomal protein L16
- Chain CW
- 50S ribosomal protein L27
- Chain DV
- Peptide chain release factor 1
- Chain DW
- Transfer RNA; tRNA
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