HL_4V7R_113
3D structure
- PDB id
- 4V7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- ACAUU
- Length
- 5 nucleotides
- Bulged bases
- 4V7R|1|B3|A|111
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V7R_113 not in the Motif Atlas
- Geometric match to HL_4YAZ_004
- Geometric discrepancy: 0.3472
- The information below is about HL_4YAZ_004
- Detailed Annotation
- Mini UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_48778.2
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 46
Unit IDs
4V7R|1|B3|A|109
4V7R|1|B3|C|110
4V7R|1|B3|A|111
4V7R|1|B3|U|112
4V7R|1|B3|U|113
Current chains
- Chain B3
- 5.8S ribosomal RNA
Nearby chains
- Chain B1
- Large subunit ribosomal RNA; LSU rRNA
- Chain BW
- 60S ribosomal protein L25
- Chain Bd
- 60S ribosomal protein L37-A
- Chain Be
- 60S ribosomal protein L39
Coloring options: