HL_4V7R_145
3D structure
- PDB id
- 4V7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- GUUUCAAGC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V7R_145 not in the Motif Atlas
- Geometric match to HL_3RG5_006
- Geometric discrepancy: 0.2494
- The information below is about HL_3RG5_006
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- tRNA anticodon loop
- Motif group
- HL_04259.3
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
4V7R|1|C1|G|1395
4V7R|1|C1|U|1396
4V7R|1|C1|U|1397
4V7R|1|C1|U|1398
4V7R|1|C1|C|1399
4V7R|1|C1|A|1400
4V7R|1|C1|A|1401
4V7R|1|C1|G|1402
4V7R|1|C1|C|1403
Current chains
- Chain C1
- 18S ribosomal RNA
Nearby chains
- Chain CT
- Guanine nucleotide-binding protein subunit beta-like protein; RACK-1
- Chain Ca
- Unassigned secondary structure
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