HL_4V7R_184

3D structure

PDB id

4V7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

4 Å

Loop

Sequence

GAUUUUAUGC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7R|1|D1|G|1565
4V7R|1|D1|A|1566
4V7R|1|D1|U|1567
4V7R|1|D1|U|1568
4V7R|1|D1|U|1569
4V7R|1|D1|U|1570
4V7R|1|D1|A|1571
4V7R|1|D1|U|1572
4V7R|1|D1|G|1573
4V7R|1|D1|C|1574

Current chains

Chain D1

25S ribosomal RNA

Nearby chains

Chain D3

5.8S ribosomal RNA; 5.8S rRNA