HL_4V7S_141

3D structure

PDB id

4V7S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to telithromycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.25 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

4V7S|1|DA|A|196

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7S_141 not in the Motif Atlas

Geometric match to HL_4WF9_006

Geometric discrepancy: 0.1213

The information below is about HL_4WF9_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

22

Unit IDs

4V7S|1|DA|G|194
4V7S|1|DA|A|195
4V7S|1|DA|A|196
4V7S|1|DA|A|197
4V7S|1|DA|C|198
4V7S|1|DA|A|199
4V7S|1|DA|U|200
4V7S|1|DA|C|201

Current chains

Chain DA

23S rRNA

Nearby chains

Chain DL

50S ribosomal protein L15

Chain DX

50S ribosomal protein L28