HL_4V7T_121

3D structure

PDB id

4V7T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to chloramphenicol.

Experimental method

X-RAY DIFFRACTION

Resolution

3.19 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

4V7T|1|CA|A|845

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7T_121 not in the Motif Atlas

Geometric match to HL_5TBW_044

Geometric discrepancy: 0.3716

The information below is about HL_5TBW_044

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.1

Basepair signature

cWW

Number of instances in this motif group

4

Unit IDs

4V7T|1|CA|C|840
4V7T|1|CA|C|841
4V7T|1|CA|U|842
4V7T|1|CA|U|843
4V7T|1|CA|G|844
4V7T|1|CA|A|845
4V7T|1|CA|G|846

Current chains

Chain CA

16S rRNA

Nearby chains

Chain CR

30S ribosomal protein S18