HL_4V7W_161
3D structure
- PDB id
- 4V7W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CGCGAAGACAGCCAGUCGAGUG
- Length
- 22 nucleotides
- Bulged bases
- 4V7W|1|DA|A|1046
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V7W_161 not in the Motif Atlas
- Geometric match to HL_5TBW_006
- Geometric discrepancy: 0.3151
- The information below is about HL_5TBW_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_71121.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 24
Unit IDs
4V7W|1|DA|C|1041
4V7W|1|DA|G|1042
4V7W|1|DA|C|1043
4V7W|1|DA|G|1044
4V7W|1|DA|A|1045
4V7W|1|DA|A|1046
4V7W|1|DA|G|1047
4V7W|1|DA|A|1048
4V7W|1|DA|C|1049
4V7W|1|DA|A|1050
4V7W|1|DA|G|1051
4V7W|1|DA|C|1052
4V7W|1|DA|C|1053
4V7W|1|DA|A|1106
4V7W|1|DA|G|1107
4V7W|1|DA|U|1108
4V7W|1|DA|C|1109
4V7W|1|DA|G|1110
4V7W|1|DA|A|1111
4V7W|1|DA|G|1112
4V7W|1|DA|U|1113
4V7W|1|DA|G|1114
Current chains
- Chain DA
- 23S ribosomal RNA
Nearby chains
- Chain DH
- 50S ribosomal protein L6
- Chain DZ
- 50S ribosomal protein L25
Coloring options: