HL_4V7Y_151

3D structure

PDB id

4V7Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CCAAGG

Length

6 nucleotides

Bulged bases

4V7Y|1|DA|A|548

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7Y_151 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.2157

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.2

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

4V7Y|1|DA|C|542
4V7Y|1|DA|C|543
4V7Y|1|DA|A|547
4V7Y|1|DA|A|548
4V7Y|1|DA|G|549
4V7Y|1|DA|G|551

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain DN

50S ribosomal protein L13

Chain DV

50S ribosomal protein L21