3D structure

PDB id
4V7Z (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the Thermus thermophilus 70S ribosome complexed with telithromycin.
Experimental method
X-RAY DIFFRACTION
Resolution
3.1 Å

Loop

Sequence
GAAGCAACGC
Length
10 nucleotides
Bulged bases
4V7Z|1|AA|G|971
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4V7Z_021 not in the Motif Atlas
Homologous match to HL_4LFB_021
Geometric discrepancy: 0.1423
The information below is about HL_4LFB_021
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_97521.1
Basepair signature
cWW-F-F-F-F-F-F-F
Number of instances in this motif group
5

Unit IDs

4V7Z|1|AA|G|963
4V7Z|1|AA|A|964
4V7Z|1|AA|A|965
4V7Z|1|AA|G|966
4V7Z|1|AA|C|967
4V7Z|1|AA|A|968
4V7Z|1|AA|A|969
4V7Z|1|AA|C|970
4V7Z|1|AA|G|971
4V7Z|1|AA|C|972

Current chains

Chain AA
16S rRNA

Nearby chains

Chain AI
30S ribosomal protein S9
Chain AJ
30S ribosomal protein S10
Chain AM
30S ribosomal protein S13
Chain AN
30S ribosomal protein S14

Coloring options:


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