HL_4V80_108

3D structure

PDB id

4V80 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to CEM-101.

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

4V80|1|CA|U|209, 4V80|1|CA|G|211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V80_108 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.266

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40612.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

4V80|1|CA|C|207
4V80|1|CA|U|208
4V80|1|CA|U|209
4V80|1|CA|C|210
4V80|1|CA|G|211
4V80|1|CA|G|212

Current chains

Chain CA

16S rRNA

Nearby chains