HL_4V85_021
3D structure
- PDB id
- 4V85 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CGAUGCAACGCG
- Length
- 12 nucleotides
- Bulged bases
- 4V85|1|AA|G|971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V85_021 not in the Motif Atlas
- Geometric match to HL_4TUE_033
- Geometric discrepancy: 0.3312
- The information below is about HL_4TUE_033
- Detailed Annotation
- tRNA D-loop
- Broad Annotation
- No text annotation
- Motif group
- HL_93616.2
- Basepair signature
- cWW-cWS-F-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
4V85|1|AA|C|962
4V85|1|AA|G|963
4V85|1|AA|A|964
4V85|1|AA|U|965
4V85|1|AA|G|966
4V85|1|AA|C|967
4V85|1|AA|A|968
4V85|1|AA|A|969
4V85|1|AA|C|970
4V85|1|AA|G|971
4V85|1|AA|C|972
4V85|1|AA|G|973
Current chains
- Chain AA
- 16S rRNA
Nearby chains
- Chain AI
- 30S ribosomal protein S9
- Chain AJ
- 30S ribosomal protein S10
- Chain AM
- 30S ribosomal protein S13
- Chain AN
- 30S ribosomal protein S14
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