HL_4V87_094
3D structure
- PDB id
- 4V87 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure analysis of ribosomal decoding.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GAAGCAACGC
- Length
- 10 nucleotides
- Bulged bases
- 4V87|1|BA|G|971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V87_094 not in the Motif Atlas
- Homologous match to HL_4LFB_021
- Geometric discrepancy: 0.0754
- The information below is about HL_4LFB_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97521.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
4V87|1|BA|G|963
4V87|1|BA|A|964
4V87|1|BA|A|965
4V87|1|BA|G|966
4V87|1|BA|C|967
4V87|1|BA|A|968
4V87|1|BA|A|969
4V87|1|BA|C|970
4V87|1|BA|G|971
4V87|1|BA|C|972
Current chains
- Chain BA
- 16S ribosomal RNA
Nearby chains
- Chain BB
- Transfer RNA; tRNA
- Chain BC
- Transfer RNA; tRNA
- Chain BL
- 30S RIBOSOMAL PROTEIN S9
- Chain BM
- 30S RIBOSOMAL PROTEIN S10
- Chain BP
- 30S RIBOSOMAL PROTEIN S13
- Chain BQ
- 30S RIBOSOMAL PROTEIN S14
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