HL_4V88_121
3D structure
- PDB id
- 4V88 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the eukaryotic ribosome at 3.0 A resolution.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UUUGGGAAUG
- Length
- 10 nucleotides
- Bulged bases
- 4V88|1|A5|G|283, 4V88|1|A5|A|284, 4V88|1|A5|A|285
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06138.1
- Basepair signature
- cWW-cWW-R-R-R
- Number of instances in this motif group
- 18
Unit IDs
4V88|1|A5|U|278
4V88|1|A5|U|279
4V88|1|A5|U|280
4V88|1|A5|G|281
4V88|1|A5|G|282
4V88|1|A5|G|283
4V88|1|A5|A|284
4V88|1|A5|A|285
4V88|1|A5|U|286
4V88|1|A5|G|287
Current chains
- Chain A5
- 25S rRNA
Nearby chains
- Chain DL
- 60S ribosomal protein L13-A
- Chain DN
- 60S ribosomal protein L15-A
- Chain Da
- 60S ribosomal protein L28
- Chain Do
- 60S ribosomal protein L42-A
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