3D structure

PDB id
4V88 (explore in PDB, NAKB, or RNA 3D Hub)
Description
The structure of the eukaryotic ribosome at 3.0 A resolution.
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
CUUCGG
Length
6 nucleotides
Bulged bases (A, C, G, U)
232U, 233C
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_91058.1
Basepair signature
cWW-cWH
Number of instances in this motif group
6

Unit IDs

4V88|1|A6|C|230
4V88|1|A6|U|231
4V88|1|A6|U|232
4V88|1|A6|C|233
4V88|1|A6|G|234
4V88|1|A6|G|235

Current chains

Chain A6
18S rRNA

Nearby chains

No other chains within 10Å

Coloring options:

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