HL_4V88_205
3D structure
- PDB id
- 4V88 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the eukaryotic ribosome at 3.0 A resolution.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- AUUUUGUUGGUUUCU
- Length
- 15 nucleotides
- Bulged bases (A, C, G, U)
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_96598.2
- Basepair signature
- cWW
- Number of instances in this motif group
- 15
Unit IDs
4V88|1|A6|A|829
4V88|1|A6|U|830
4V88|1|A6|U|831
4V88|1|A6|U|832
4V88|1|A6|U|833
4V88|1|A6|G|834
4V88|1|A6|U|835
4V88|1|A6|U|836
4V88|1|A6|G|837
4V88|1|A6|G|838
4V88|1|A6|U|839
4V88|1|A6|U|840
4V88|1|A6|U|841
4V88|1|A6|C|842
4V88|1|A6|U|843
Current chains
- Chain A6
- 18S rRNA
Nearby chains
- Chain CL
- 40S ribosomal protein S11-A
Coloring options: