HL_4V88_215

3D structure

PDB id

4V88 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of the eukaryotic ribosome at 3.0 A resolution.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUUAAUUG

Length

8 nucleotides

Bulged bases

4V88|1|A6|U|1314

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77436.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

4V88|1|A6|C|1309
4V88|1|A6|U|1310
4V88|1|A6|U|1311
4V88|1|A6|A|1312
4V88|1|A6|A|1313
4V88|1|A6|U|1314
4V88|1|A6|U|1315
4V88|1|A6|G|1316

Current chains

Chain A6

18S rRNA

Nearby chains

Chain CR

40S ribosomal protein S17-A