HL_4V89_071

3D structure

PDB id

4V89 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

CAGG

Length

4 nucleotides

Bulged bases

4V89|1|BA|A|1566

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V89_071 not in the Motif Atlas

Homologous match to HL_5J7L_172

Geometric discrepancy: 0.0966

The information below is about HL_5J7L_172

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

4V89|1|BA|C|1565
4V89|1|BA|A|1566
4V89|1|BA|G|1567
4V89|1|BA|G|1568

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BC

50S ribosomal protein L2