HL_4V8B_033
3D structure
- PDB id
- 4V8B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UGGAAUUGGUAGACA
- Length
- 15 nucleotides
- Bulged bases
- 4V8B|1|AB|U|16, 4V8B|1|AB|U|17, 4V8B|1|AB|G|18, 4V8B|1|AB|G|22
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V8B_033 not in the Motif Atlas
- Homologous match to HL_4WSM_208
- Geometric discrepancy: 0.4572
- The information below is about HL_4WSM_208
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_68572.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
4V8B|1|AB|U|11
4V8B|1|AB|G|12
4V8B|1|AB|G|13
4V8B|1|AB|A|14
4V8B|1|AB|A|15
4V8B|1|AB|U|16
4V8B|1|AB|U|17
4V8B|1|AB|G|18
4V8B|1|AB|G|19
4V8B|1|AB|U|20
4V8B|1|AB|A|21
4V8B|1|AB|G|22
4V8B|1|AB|A|23
4V8B|1|AB|C|24
4V8B|1|AB|A|25
Current chains
- Chain AB
- TRNA-LEU
Nearby chains
- Chain AC
- Transfer RNA; tRNA
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: