Motif HL_68572.2 Version HL_68572.2 of this group appears in releases 4.0 to 4.15
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 3-6 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4GCW_001 | 4GCW | 0.6915 | 6 | B | tRNA | C | 11 | U | 12 | C | 13 | A | 14 | G | 15 | G | 22 | A | 23 | G | 24 | cWW | ncWW | |
| 2 | HL_7KJT_001 | 7KJT | 0.0000 | 6 | A | tRNA | U | 11 | C | 12 | A | 13 | G | 14 | U | 15 | G | 22 | A | 23 | G | 24 | ncWW | ||
| 3 | HL_4WSM_208 | 4WSM | 0.5681 | 7 | 1K | tRNA | U | 11 | G | 12 | G | 13 | A | 14 | A | 15 | A | 23 | C | 24 | A | 25 | ncWW | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUCAGCAGGUAGAG | 1 |
| UCAGUCUGGCAGAG | 1 |
| UGGAAUUGGUAGACA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UCAGCAGGUAGA | 1 |
| CAGUCUGGCAGA | 1 |
| GGAAUUGGUAGAC | 1 |
Release history
| Release | 4.0 | 4.1 | 4.2 | 4.3 | 4.4 | 4.5 | 4.6 | 4.7 | 4.8 | 4.9 | 4.10 | 4.11 | 4.12 | 4.13 | 4.14 | 4.15 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2025-08-13 | 2025-09-10 | 2025-10-08 | 2025-11-05 | 2025-12-03 | 2025-12-31 | 2026-01-28 | 2026-02-25 | 2026-03-25 | 2026-04-22 | 2026-05-20 | 2026-06-17 | 2026-07-15 | 2026-08-12 | 2026-09-09 | 2026-10-07 |
| Status | Updated, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-F-F-F-F-F-F
- Heat map statistics
- Min 0.57 | Avg 0.44 | Max 0.73
Coloring options: