HL_4V8B_074

3D structure

PDB id

4V8B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGAUGAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V8B_074 not in the Motif Atlas

Geometric match to HL_6U8D_003

Geometric discrepancy: 0.3

The information below is about HL_6U8D_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32346.5

Basepair signature

cWW-F

Number of instances in this motif group

10

Unit IDs

4V8B|1|BA|G|1171
4V8B|1|BA|G|1173
4V8B|1|BA|A|1174
4V8B|1|BA|U|1175
4V8B|1|BA|G|1176
4V8B|1|BA|A|1177
4V8B|1|BA|C|1178

Current chains

Chain BA

RNA (2912-MER)

Nearby chains