HL_4V8B_095

3D structure

PDB id

4V8B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUCCGG

Length

6 nucleotides

Bulged bases

4V8B|1|BA|C|2145

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V8B_095 not in the Motif Atlas

Homologous match to HL_5J7L_184

Geometric discrepancy: 0.4963

The information below is about HL_5J7L_184

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_79299.1

Basepair signature

cWW-tSW-R

Number of instances in this motif group

44

Unit IDs

4V8B|1|BA|C|2143
4V8B|1|BA|U|2144
4V8B|1|BA|C|2145
4V8B|1|BA|C|2146
4V8B|1|BA|G|2147
4V8B|1|BA|G|2148

Current chains

Chain BA

RNA (2912-MER)

Nearby chains

Chain AN

30S RIBOSOMAL PROTEIN S11