HL_4V8D_062

3D structure

PDB id

4V8D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGUUGAG

Length

7 nucleotides

Bulged bases

4V8D|1|BA|U|614, 4V8D|1|BA|G|615

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V8D_062 not in the Motif Atlas

Homologous match to HL_7A0S_019

Geometric discrepancy: 0.2943

The information below is about HL_7A0S_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13184.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

9

Unit IDs

4V8D|1|BA|C|611
4V8D|1|BA|G|612
4V8D|1|BA|U|613
4V8D|1|BA|U|614
4V8D|1|BA|G|615
4V8D|1|BA|A|616
4V8D|1|BA|G|617

Current chains

Chain BA

RNA (2912-MER)

Nearby chains

Chain BF

50S ribosomal protein L4