HL_4V8E_027

3D structure

PDB id

4V8E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GGGGCCCACCAGCCUAC

Length

17 nucleotides

Bulged bases

4V8E|1|AA|C|888, 4V8E|1|AA|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8E|1|AA|G|880
4V8E|1|AA|G|881
4V8E|1|AA|G|882
4V8E|1|AA|G|883
4V8E|1|AA|C|884
4V8E|1|AA|C|885
4V8E|1|AA|C|886
4V8E|1|AA|A|887
4V8E|1|AA|C|888
4V8E|1|AA|C|889
4V8E|1|AA|A|890
4V8E|1|AA|G|892
4V8E|1|AA|C|893
4V8E|1|AA|C|894
4V8E|1|AA|U|895
4V8E|1|AA|A|896
4V8E|1|AA|C|897

Current chains

Chain AA

RNA (2912-MER)

Nearby chains

Chain AV

50S ribosomal protein L25

Chain BB

TRNA-TYR

Chain BP

30S RIBOSOMAL PROTEIN S13