HL_4V8E_143

3D structure

PDB id

4V8E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CCCACCAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V8E_143 not in the Motif Atlas

Homologous match to HL_5J7L_158

Geometric discrepancy: 0.4594

The information below is about HL_5J7L_158

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8E|1|CA|C|932
4V8E|1|CA|C|933
4V8E|1|CA|C|934
4V8E|1|CA|A|935
4V8E|1|CA|C|936
4V8E|1|CA|C|937
4V8E|1|CA|A|938
4V8E|1|CA|G|939

Current chains

Chain CA

RNA (2912-MER)

Nearby chains

Chain DP

30S RIBOSOMAL PROTEIN S13