HL_4V8G_067

3D structure

PDB id

4V8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of RMF bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GCAAAUC

Length

7 nucleotides

Bulged bases

4V8G|1|BA|C|1493, 4V8G|1|BA|U|1497

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V8G_067 not in the Motif Atlas

Homologous match to HL_7RQB_038

Geometric discrepancy: 0.1201

The information below is about HL_7RQB_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_46680.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

27

Unit IDs

4V8G|1|BA|G|1492
4V8G|1|BA|C|1493
4V8G|1|BA|A|1494
4V8G|1|BA|A|1495
4V8G|1|BA|A|1496
4V8G|1|BA|U|1497
4V8G|1|BA|C|1498

Current chains

Chain BA

23S Ribosomal RNA

Nearby chains

Chain BD

50S Ribosomal Protein L2