HL_4V8H_058
3D structure
- PDB id
- 4V8H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of HPF bound to the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CCCACCAG
- Length
- 8 nucleotides
- Bulged bases
- 4V8H|1|BA|A|887, 4V8H|1|BA|C|888
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V8H_058 not in the Motif Atlas
- Homologous match to HL_9DFE_024
- Geometric discrepancy: 0.5575
- The information below is about HL_9DFE_024
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87553.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
4V8H|1|BA|C|884
4V8H|1|BA|C|885
4V8H|1|BA|C|886
4V8H|1|BA|A|887
4V8H|1|BA|C|888
4V8H|1|BA|C|889
4V8H|1|BA|A|890
4V8H|1|BA|G|892
Current chains
- Chain BA
- 23S Ribosomal RNA
Nearby chains
- Chain AM
- 30S Ribosomal Protein S13
- Chain AS
- 30S Ribosomal Protein S19
Coloring options: