HL_4V8H_062

3D structure

PDB id

4V8H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of HPF bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGAUGAC

Length

7 nucleotides

Bulged bases

4V8H|1|BA|U|1175

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V8H_062 not in the Motif Atlas

Homologous match to HL_7RQB_031

Geometric discrepancy: 0.3925

The information below is about HL_7RQB_031

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_94651.3

Basepair signature

cWW-tSS

Number of instances in this motif group

6

Unit IDs

4V8H|1|BA|G|1171
4V8H|1|BA|G|1173
4V8H|1|BA|A|1174
4V8H|1|BA|U|1175
4V8H|1|BA|G|1176
4V8H|1|BA|A|1177
4V8H|1|BA|C|1178

Current chains

Chain BA

23S Ribosomal RNA

Nearby chains