HL_4V8J_030

3D structure

PDB id

4V8J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome ram mutation G347U.

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

4V8J|1|AA|A|1431

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V8J_030 not in the Motif Atlas

Homologous match to HL_4LFB_031

Geometric discrepancy: 0.1849

The information below is about HL_4LFB_031

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

4V8J|1|AA|C|1429
4V8J|1|AA|U|1430
4V8J|1|AA|A|1431
4V8J|1|AA|C|1432
4V8J|1|AA|G|1433
4V8J|1|AA|G|1434

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AT

30S ribosomal protein S20