HL_4V8J_120

3D structure

PDB id

4V8J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome ram mutation G347U.

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

CGACGAG

Length

7 nucleotides

Bulged bases

4V8J|1|CA|C|455

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V8J_120 not in the Motif Atlas

Homologous match to HL_4LFB_012

Geometric discrepancy: 0.1405

The information below is about HL_4LFB_012

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

4V8J|1|CA|C|452
4V8J|1|CA|G|453
4V8J|1|CA|A|454
4V8J|1|CA|C|455
4V8J|1|CA|G|456
4V8J|1|CA|A|457
4V8J|1|CA|G|458

Current chains

Chain CA

16S rRNA

Nearby chains

Chain CP

30S ribosomal protein S16