HL_4V8J_126

3D structure

PDB id

4V8J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome ram mutation G347U.

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

GUCUC

Length

5 nucleotides

Bulged bases

4V8J|1|CA|U|822, 4V8J|1|CA|U|824

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V8J_126 not in the Motif Atlas

Homologous match to HL_4LFB_018

Geometric discrepancy: 0.1916

The information below is about HL_4LFB_018

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

4V8J|1|CA|G|821
4V8J|1|CA|U|822
4V8J|1|CA|C|823
4V8J|1|CA|U|824
4V8J|1|CA|C|825

Current chains

Chain CA

16S rRNA

Nearby chains

Chain CB

30S ribosomal protein S2