3D structure

PDB id
4V8J (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the bacterial ribosome ram mutation G347U.
Experimental method
X-RAY DIFFRACTION
Resolution
3.9 Å

Loop

Sequence
CCAGCGGUUCGGCCGG
Length
16 nucleotides
Bulged bases
4V8J|1|CA|U|1118
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V8J|1|CA|C|1110
4V8J|1|CA|C|1111
4V8J|1|CA|A|1112
4V8J|1|CA|G|1113
4V8J|1|CA|C|1114
4V8J|1|CA|G|1115
4V8J|1|CA|G|1116
4V8J|1|CA|U|1117
4V8J|1|CA|U|1118
4V8J|1|CA|C|1119
4V8J|1|CA|G|1120
4V8J|1|CA|G|1121
4V8J|1|CA|C|1122
4V8J|1|CA|C|1123
4V8J|1|CA|G|1124
4V8J|1|CA|G|1125

Current chains

Chain CA
16S rRNA

Nearby chains

Chain CI
30S ribosomal protein S9

Coloring options:

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