HL_4V8J_143
3D structure
- PDB id
- 4V8J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the bacterial ribosome ram mutation G347U.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.9 Å
Loop
- Sequence
- CAGUCGGUAG
- Length
- 10 nucleotides
- Bulged bases
- 4V8J|1|CW|C|17, 4V8J|1|CW|G|18, 4V8J|1|CW|U|20
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V8J_143 not in the Motif Atlas
- Homologous match to HL_3WFS_001
- Geometric discrepancy: 0.4292
- The information below is about HL_3WFS_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V8J|1|CW|C|13
4V8J|1|CW|A|14
4V8J|1|CW|G|15
4V8J|1|CW|U|16
4V8J|1|CW|C|17
4V8J|1|CW|G|18
4V8J|1|CW|G|19
4V8J|1|CW|U|20
4V8J|1|CW|A|21
4V8J|1|CW|G|22
Current chains
- Chain CW
- tRNA-Phe
Nearby chains
- Chain DA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: