HL_4V8J_145

3D structure

PDB id

4V8J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome ram mutation G347U.

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

UUGGUUCGAUUCCGA

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V8J_145 not in the Motif Atlas

Homologous match to HL_5E81_238

Geometric discrepancy: 0.542

The information below is about HL_5E81_238

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8J|1|CW|U|50
4V8J|1|CW|U|51
4V8J|1|CW|G|52
4V8J|1|CW|G|53
4V8J|1|CW|U|54
4V8J|1|CW|U|55
4V8J|1|CW|C|56
4V8J|1|CW|G|57
4V8J|1|CW|A|58
4V8J|1|CW|U|59
4V8J|1|CW|U|60
4V8J|1|CW|C|61
4V8J|1|CW|C|62
4V8J|1|CW|G|63
4V8J|1|CW|A|64

Current chains

Chain CW

tRNA-Phe

Nearby chains

Chain DA

Large subunit ribosomal RNA; LSU rRNA

Chain DC

50S ribosomal protein L1