HL_4V8P_099
3D structure
- PDB id
- 4V8P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T.thermophila 60S ribosomal subunit in complex with initiation factor 6.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.52 Å
Loop
- Sequence
- GUGGAAAAAC
- Length
- 10 nucleotides
- Bulged bases
- 4V8P|1|D1|A|716
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_09150.1
- Basepair signature
- cWW-cWW-tSH-R-R-R
- Number of instances in this motif group
- 1
Unit IDs
4V8P|1|D1|G|710
4V8P|1|D1|U|711
4V8P|1|D1|G|712
4V8P|1|D1|G|713
4V8P|1|D1|A|714
4V8P|1|D1|A|715
4V8P|1|D1|A|716
4V8P|1|D1|A|717
4V8P|1|D1|A|718
4V8P|1|D1|C|719
Current chains
- Chain D1
- 26S RRNA
Nearby chains
- Chain C2
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain CC
- RPL4
- Chain CL
- RIBOSOMAL PROTEIN L15
- Chain CS
- RPL26
- Chain DU
- RPL13
Coloring options: