4V8P Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_4V8P_001 | 1/A1/36:43 | No text annotation | geometric HL_4WF9_006 HL_30068.1 | |
| HL_4V8P_002 | 1/A1/67:72 | No text annotation | homologous HL_5TBW_002 NA | |
| HL_4V8P_003 | 1/A1/88:94 | No text annotation | homologous HL_8C3A_003 NA | |
| HL_4V8P_004 | 1/A1/130:136 | No text annotation | homologous HL_8C3A_004 NA | |
| HL_4V8P_005 | 1/A1/194:201 | T-loop with 2 stacked bulged bases | homologous HL_5TBW_005 NA | |
| HL_4V8P_006 | 1/A1/208:212 | No text annotation | homologous HL_8C3A_006 NA | |
| HL_4V8P_007 | 1/A1/216:224 | T-loop with unstacked turn | homologous HL_5TBW_007 NA | |
| HL_4V8P_008 | 1/A1/277:286 | No text annotation | homologous HL_8C3A_008 NA | |
| HL_4V8P_009 | 1/A1/302:311 | Pseudoknot geometry | homologous HL_5TBW_009 NA | |
| HL_4V8P_010 | 1/A1/356:361 | GNRA | homologous HL_8C3A_010 NA | |
| HL_4V8P_011 | 1/A1/381:386 | GNRA | homologous HL_5TBW_011 NA | |
| HL_4V8P_012 | 1/A1/486:493 | GNRA wlth tandem sheared | geometric HL_5J7L_154 HL_81538.1 | |
| HL_4V8P_013 | 1/A1/582:587 | GNRA | geometric HL_5TBW_017 NA | |
| HL_4V8P_321 | 1/A1/627:630 | No text annotation | ||
| HL_4V8P_015 | 1/A1/664:673 | T-loop with 2 stacked bulged bases | homologous HL_5TBW_014 NA | |
| HL_4V8P_309 | 1/A1/711:718 | No text annotation | geometric HL_2ZZM_002 HL_13963.2 | |
| HL_4V8P_017 | 1/A1/732:737 | GNRA | homologous HL_8C3A_016 NA | |
| HL_4V8P_018 | 1/A1/757:762 | GNRA | homologous HL_5TBW_017 NA | |
| HL_4V8P_019 | 1/A1/788:792 | Mini UNCG | geometric HL_5J7L_204 HL_46878.1 | |
| HL_4V8P_020 | 1/A1/869:874 | GNRA | homologous HL_5TBW_019 NA | |
| HL_4V8P_021 | 1/A1/901:910 | No text annotation | homologous HL_8C3A_020 NA | |
| HL_4V8P_022 | 1/A1/935:943 | No text annotation | homologous HL_8C3A_021 NA | |
| HL_4V8P_023 | 1/A1/983:988 | Externally structured | homologous HL_5TBW_022 NA | |
| HL_4V8P_025 | 1/A1/1104:1111 | No text annotation | geometric HL_5TBW_024 NA | |
| HL_4V8P_026 | 1/A1/1153:1159 | GNRA | homologous HL_5TBW_025 NA | |
| HL_4V8P_027 | 1/A1/1175:1182 | No text annotation | homologous HL_5TBW_026 NA | |
| HL_4V8P_028 | 1/A1/1374:1384 | Externally structured | geometric HL_8C3A_022 NA | |
| HL_4V8P_029 | 1/A1/1429:1434 | GNRA | homologous HL_5TBW_030 NA | |
| HL_4V8P_030 | 1/A1/1488:1496 | T-loop with 2 stacked bulged bases | homologous HL_5TBW_031 NA | |
| HL_4V8P_031 | 1/A1/1532:1538 | Pseudoknot geometry with 3' bulge | homologous HL_5TBW_032 NA | |
| HL_4V8P_032 | 1/A1/1569:1576 | GNRA with extra cWW | geometric HL_7A0S_056 HL_04259.1 | |
| HL_4V8P_034 | 1/A1/1624:1633 | No text annotation | homologous HL_8C3A_035 NA | |
| HL_4V8P_035 | 1/A1/1658:1663 | GNRA | homologous HL_5TBW_036 NA | |
| HL_4V8P_036 | 1/A1/1704:1712 | No text annotation | homologous HL_8C3A_037 NA | |
| HL_4V8P_037 | 1/A1/1743:1749 | No text annotation | homologous HL_8C3A_038 NA | |
| HL_4V8P_039 | 1/A1/1818:1822 | No text annotation | homologous HL_8C3A_040 NA | |
| HL_4V8P_040 | 1/A1/1868:1875 | No text annotation | homologous HL_5TBW_041 NA | |
| HL_4V8P_041 | 1/A1/1886:1892 | GNRA | homologous HL_8C3A_042 NA | |
| HL_4V8P_042 | 1/A1/1947:1952 | UNCG | homologous HL_8C3A_043 NA | |
| HL_4V8P_044 | 1/A1/2106:2110 | No text annotation | homologous HL_8C3A_045 NA | |
| HL_4V8P_045 | 1/A1/2131:2141 | No text annotation | homologous HL_5TBW_046 NA | |
| HL_4V8P_046 | 1/A1/2160:2165 | GNRA | homologous HL_8C3A_047 NA | |
| HL_4V8P_047 | 1/A1/2214:2221 | No text annotation | geometric HL_6CF2_001 HL_39454.2 | |
| HL_4V8P_048 | 1/A1/2249:2257 | No text annotation | geometric HL_8C3A_054 NA | |
| HL_4V8P_049 | 1/A1/2287:2295 | No text annotation | homologous HL_5TBW_050 NA | |
| HL_4V8P_050 | 1/A1/2364:2373 | No text annotation | homologous HL_8C3A_051 NA | |
| HL_4V8P_052 | 1/A1/2531:2536 | GNRA | geometric HL_4QLM_001 HL_37824.5 | |
| HL_4V8P_053 | 1/A1/2558:2561 | No text annotation | homologous HL_8C3A_054 NA | |
| HL_4V8P_054 | 1/A1/2605:2613 | No text annotation | homologous HL_5TBW_054 NA | |
| HL_4V8P_055 | 1/A1/2622:2634 | No text annotation | homologous HL_8C3A_056 NA | |
| HL_4V8P_056 | 1/A1/2662:2670 | No text annotation | homologous HL_5TBW_056 NA | |
| HL_4V8P_057 | 1/A1/2682:2689 | Pseudoknot geometry | homologous HL_5TBW_057 NA | |
| HL_4V8P_323 | 1/A1/2714:2720 | No text annotation | ||
| HL_4V8P_059 | 1/A1/2733:2738 | GNRA | homologous HL_8C3A_060 NA | |
| HL_4V8P_060 | 1/A1/2764:2772 | Pseudoknot geometry | homologous HL_5TBW_060 NA | |
| HL_4V8P_061 | 1/A1/2828:2836 | No text annotation | homologous HL_5TBW_061 NA | |
| HL_4V8P_062 | 1/A1/2885:2892 | No text annotation | homologous HL_5TBW_062 NA | |
| HL_4V8P_063 | 1/A1/2908:2914 | No text annotation | homologous HL_5TBW_063 NA | |
| HL_4V8P_064 | 1/A1/2951:2956 | GNRA | homologous HL_8C3A_065 NA | |
| HL_4V8P_065 | 1/A1/3014:3019 | GNRA | homologous HL_5TBW_065 NA | |
| HL_4V8P_066 | 1/A1/3057:3062 | Ribsomal LSU H95 | homologous HL_8C3A_067 NA | |
| HL_4V8P_067 | 1/A1/3099:3113 | No text annotation | homologous HL_5TBW_067 NA | |
| HL_4V8P_068 | 1/A1/3161:3178 | Mini UNCG | geometric HL_4OOG_001 HL_56334.1 | |
| HL_4V8P_069 | 1/A1/3202:3209 | UNCG | geometric HL_4LGT_001 HL_34617.3 | |
| HL_4V8P_070 | 1/A1/3263:3271 | No text annotation | homologous HL_8C3A_071 NA | |
| HL_4V8P_071 | 1/A1/3306:3313 | No text annotation | geometric HL_3SKL_006 NA | |
| HL_4V8P_072 | 1/B2/50:59 | No text annotation | geometric HL_7RQB_001 NA | |
| HL_4V8P_073 | 1/B2/72:90 | No text annotation | homologous HL_8C3A_230 NA | |
| HL_4V8P_074 | 1/B2/109:115 | No text annotation | homologous HL_5TBW_075 NA | |
| HL_4V8P_310 | 1/B2/122:129 | GNRA wlth tandem sheared | geometric HL_3HHN_010 HL_81538.1 | |
| HL_4V8P_311 | 1/B3/32:45 | No text annotation | homologous HL_4V9F_074 HL_97756.2 | |
| HL_4V8P_076 | 1/B3/36:41 | No text annotation | homologous HL_5J7L_203 HL_47787.1 | |
| HL_4V8P_077 | 1/B3/86:91 | GNRA | homologous HL_5TBW_186 NA | |
| HL_4V8P_078 | 1/C2/50:59 | No text annotation | geometric HL_7RQB_001 NA | |
| HL_4V8P_079 | 1/C2/72:90 | No text annotation | homologous HL_8C3A_230 NA | |
| HL_4V8P_080 | 1/C2/109:115 | No text annotation | homologous HL_5TBW_075 NA | |
| HL_4V8P_312 | 1/C2/122:129 | GNRA wlth tandem sheared | geometric HL_3HHN_010 HL_81538.1 | |
| HL_4V8P_313 | 1/C3/32:45 | No text annotation | homologous HL_4V9F_074 HL_97756.2 | |
| HL_4V8P_082 | 1/C3/36:41 | No text annotation | geometric HL_5NFV_001 NA | |
| HL_4V8P_083 | 1/C3/86:91 | GNRA | homologous HL_5TBW_186 NA | |
| HL_4V8P_084 | 1/D1/36:43 | No text annotation | geometric HL_4WF9_006 HL_30068.1 | |
| HL_4V8P_085 | 1/D1/67:72 | No text annotation | homologous HL_5TBW_002 NA | |
| HL_4V8P_086 | 1/D1/88:94 | No text annotation | homologous HL_8C3A_003 NA | |
| HL_4V8P_087 | 1/D1/130:136 | No text annotation | homologous HL_8C3A_004 NA | |
| HL_4V8P_088 | 1/D1/194:201 | T-loop with 2 stacked bulged bases | homologous HL_5TBW_005 NA | |
| HL_4V8P_089 | 1/D1/208:212 | No text annotation | homologous HL_8C3A_006 NA | |
| HL_4V8P_090 | 1/D1/216:224 | T-loop with unstacked turn | ||
| HL_4V8P_091 | 1/D1/277:286 | No text annotation | homologous HL_8C3A_008 NA | |
| HL_4V8P_092 | 1/D1/302:311 | Pseudoknot geometry | homologous HL_5TBW_009 NA | |
| HL_4V8P_093 | 1/D1/356:361 | GNRA | homologous HL_8C3A_010 NA | |
| HL_4V8P_094 | 1/D1/381:386 | GNRA | homologous HL_5TBW_011 NA | |
| HL_4V8P_095 | 1/D1/486:493 | GNRA wlth tandem sheared | geometric HL_5J7L_154 HL_81538.1 | |
| HL_4V8P_096 | 1/D1/582:587 | GNRA | geometric HL_5TBW_017 NA | |
| HL_4V8P_324 | 1/D1/627:630 | No text annotation | ||
| HL_4V8P_098 | 1/D1/664:673 | T-loop with 2 stacked bulged bases | homologous HL_5TBW_014 NA | |
| HL_4V8P_314 | 1/D1/711:718 | No text annotation | geometric HL_2ZZM_002 HL_13963.2 | |
| HL_4V8P_100 | 1/D1/732:737 | GNRA | homologous HL_8C3A_016 NA | |
| HL_4V8P_101 | 1/D1/757:762 | GNRA | homologous HL_5TBW_017 NA | |
| HL_4V8P_102 | 1/D1/788:792 | Mini UNCG | geometric HL_5J7L_204 HL_46878.1 | |
| HL_4V8P_103 | 1/D1/869:874 | GNRA | homologous HL_8C3A_019 NA | |
| HL_4V8P_104 | 1/D1/901:910 | No text annotation | homologous HL_8C3A_020 NA | |
| HL_4V8P_105 | 1/D1/935:943 | No text annotation | homologous HL_8C3A_021 NA | |
| HL_4V8P_106 | 1/D1/983:988 | Externally structured | homologous HL_5TBW_022 NA | |
| HL_4V8P_107 | 1/D1/1050:1054 | No text annotation | ||
| HL_4V8P_108 | 1/D1/1104:1111 | No text annotation | homologous HL_8C3A_024 NA | |
| HL_4V8P_109 | 1/D1/1153:1159 | GNRA | homologous HL_5TBW_025 NA | |
| HL_4V8P_110 | 1/D1/1175:1182 | No text annotation | homologous HL_5TBW_026 NA | |
| HL_4V8P_111 | 1/D1/1374:1384 | Externally structured | geometric HL_8C3A_022 NA | |
| HL_4V8P_112 | 1/D1/1429:1434 | GNRA | homologous HL_5TBW_030 NA | |
| HL_4V8P_113 | 1/D1/1488:1496 | T-loop with 2 stacked bulged bases | homologous HL_5TBW_031 NA | |
| HL_4V8P_114 | 1/D1/1532:1538 | Pseudoknot geometry with 3' bulge | homologous HL_5TBW_032 NA | |
| HL_4V8P_115 | 1/D1/1569:1576 | GNRA with extra cWW | geometric HL_7A0S_056 HL_04259.1 | |
| HL_4V8P_325 | 1/D1/1594:1599 | No text annotation | ||
| HL_4V8P_117 | 1/D1/1624:1633 | No text annotation | homologous HL_8C3A_035 NA | |
| HL_4V8P_118 | 1/D1/1658:1663 | GNRA | homologous HL_5TBW_036 NA | |
| HL_4V8P_119 | 1/D1/1704:1712 | No text annotation | homologous HL_8C3A_037 NA | |
| HL_4V8P_120 | 1/D1/1743:1749 | No text annotation | homologous HL_8C3A_038 NA | |
| HL_4V8P_122 | 1/D1/1818:1822 | No text annotation | homologous HL_8C3A_040 NA | |
| HL_4V8P_123 | 1/D1/1868:1875 | No text annotation | homologous HL_5TBW_041 NA | |
| HL_4V8P_124 | 1/D1/1886:1892 | GNRA | ||
| HL_4V8P_125 | 1/D1/1947:1952 | UNCG | ||
| HL_4V8P_127 | 1/D1/2106:2110 | No text annotation | homologous HL_8C3A_045 NA | |
| HL_4V8P_128 | 1/D1/2131:2141 | No text annotation | homologous HL_5TBW_046 NA | |
| HL_4V8P_129 | 1/D1/2160:2165 | GNRA | homologous HL_8C3A_047 NA | |
| HL_4V8P_130 | 1/D1/2214:2221 | No text annotation | geometric HL_6CF2_001 HL_39454.2 | |
| HL_4V8P_131 | 1/D1/2249:2257 | No text annotation | geometric HL_8KAL_003 NA | |
| HL_4V8P_132 | 1/D1/2287:2295 | No text annotation | homologous HL_5TBW_050 NA | |
| HL_4V8P_133 | 1/D1/2364:2373 | No text annotation | homologous HL_8C3A_051 NA | |
| HL_4V8P_135 | 1/D1/2531:2536 | GNRA | ||
| HL_4V8P_136 | 1/D1/2558:2561 | No text annotation | homologous HL_8C3A_054 NA | |
| HL_4V8P_137 | 1/D1/2605:2613 | No text annotation | homologous HL_5TBW_054 NA | |
| HL_4V8P_138 | 1/D1/2622:2634 | No text annotation | homologous HL_8C3A_056 NA | |
| HL_4V8P_139 | 1/D1/2662:2670 | No text annotation | homologous HL_5TBW_056 NA | |
| HL_4V8P_140 | 1/D1/2682:2689 | Pseudoknot geometry | homologous HL_5TBW_057 NA | |
| HL_4V8P_326 | 1/D1/2714:2720 | No text annotation | ||
| HL_4V8P_142 | 1/D1/2733:2738 | GNRA | homologous HL_8C3A_060 NA | |
| HL_4V8P_143 | 1/D1/2764:2772 | Pseudoknot geometry | homologous HL_5TBW_060 NA | |
| HL_4V8P_144 | 1/D1/2828:2836 | No text annotation | homologous HL_5TBW_061 NA | |
| HL_4V8P_145 | 1/D1/2885:2892 | No text annotation | homologous HL_5TBW_062 NA | |
| HL_4V8P_146 | 1/D1/2908:2914 | No text annotation | geometric HL_5TBW_063 NA | |
| HL_4V8P_147 | 1/D1/2951:2956 | GNRA | homologous HL_8C3A_065 NA | |
| HL_4V8P_148 | 1/D1/3014:3019 | GNRA | geometric HL_5B2T_003 NA | |
| HL_4V8P_149 | 1/D1/3057:3062 | Ribsomal LSU H95 | homologous HL_8C3A_067 NA | |
| HL_4V8P_150 | 1/D1/3099:3113 | No text annotation | homologous HL_5TBW_067 NA | |
| HL_4V8P_151 | 1/D1/3161:3178 | Mini UNCG | geometric HL_4OOG_001 HL_56334.1 | |
| HL_4V8P_152 | 1/D1/3202:3209 | UNCG | geometric HL_4LGT_001 HL_34617.3 | |
| HL_4V8P_153 | 1/D1/3263:3271 | No text annotation | homologous HL_8C3A_071 NA | |
| HL_4V8P_155 | 1/E2/50:59 | No text annotation | geometric HL_7RQB_001 NA | |
| HL_4V8P_156 | 1/E2/72:90 | No text annotation | homologous HL_8C3A_230 NA | |
| HL_4V8P_157 | 1/E2/109:115 | No text annotation | homologous HL_5TBW_075 NA | |
| HL_4V8P_315 | 1/E2/122:129 | GNRA wlth tandem sheared | geometric HL_3HHN_010 HL_81538.1 | |
| HL_4V8P_316 | 1/E3/32:45 | No text annotation | homologous HL_4V9F_074 HL_97756.2 | |
| HL_4V8P_159 | 1/E3/36:41 | No text annotation | homologous HL_5J7L_203 HL_47787.1 | |
| HL_4V8P_160 | 1/E3/86:91 | GNRA | homologous HL_5TBW_186 NA | |
| HL_4V8P_161 | 1/F1/36:43 | No text annotation | geometric HL_4WF9_006 HL_30068.1 | |
| HL_4V8P_162 | 1/F1/67:72 | No text annotation | homologous HL_5TBW_002 NA | |
| HL_4V8P_163 | 1/F1/88:94 | No text annotation | homologous HL_8C3A_003 NA | |
| HL_4V8P_164 | 1/F1/130:136 | No text annotation | homologous HL_8C3A_004 NA | |
| HL_4V8P_165 | 1/F1/194:201 | T-loop with 2 stacked bulged bases | homologous HL_5TBW_005 NA | |
| HL_4V8P_166 | 1/F1/208:212 | No text annotation | homologous HL_8C3A_006 NA | |
| HL_4V8P_167 | 1/F1/216:224 | T-loop with unstacked turn | homologous HL_5TBW_007 NA | |
| HL_4V8P_168 | 1/F1/277:286 | No text annotation | homologous HL_8C3A_008 NA | |
| HL_4V8P_169 | 1/F1/302:311 | Pseudoknot geometry | homologous HL_5TBW_009 NA | |
| HL_4V8P_170 | 1/F1/356:361 | GNRA | homologous HL_8C3A_010 NA | |
| HL_4V8P_171 | 1/F1/381:386 | GNRA | homologous HL_5TBW_011 NA | |
| HL_4V8P_172 | 1/F1/486:493 | GNRA wlth tandem sheared | geometric HL_5J7L_154 HL_81538.1 | |
| HL_4V8P_173 | 1/F1/582:587 | GNRA | geometric HL_5TBW_017 NA | |
| HL_4V8P_327 | 1/F1/627:630 | No text annotation | ||
| HL_4V8P_175 | 1/F1/664:673 | T-loop with 2 stacked bulged bases | homologous HL_5TBW_014 NA | |
| HL_4V8P_317 | 1/F1/711:718 | No text annotation | geometric HL_2ZZM_002 HL_13963.2 | |
| HL_4V8P_177 | 1/F1/732:737 | GNRA | homologous HL_8C3A_016 NA | |
| HL_4V8P_178 | 1/F1/757:762 | GNRA | homologous HL_5TBW_017 NA | |
| HL_4V8P_179 | 1/F1/788:792 | Mini UNCG | geometric HL_5J7L_204 HL_46878.1 | |
| HL_4V8P_180 | 1/F1/869:874 | GNRA | homologous HL_8C3A_019 NA | |
| HL_4V8P_181 | 1/F1/901:910 | No text annotation | homologous HL_8C3A_020 NA | |
| HL_4V8P_182 | 1/F1/935:943 | No text annotation | homologous HL_8C3A_021 NA | |
| HL_4V8P_183 | 1/F1/983:988 | Externally structured | homologous HL_5TBW_022 NA | |
| HL_4V8P_185 | 1/F1/1104:1111 | No text annotation | homologous HL_8C3A_024 NA | |
| HL_4V8P_186 | 1/F1/1153:1159 | GNRA | homologous HL_5TBW_025 NA | |
| HL_4V8P_187 | 1/F1/1175:1182 | No text annotation | homologous HL_5TBW_026 NA | |
| HL_4V8P_188 | 1/F1/1374:1384 | Externally structured | geometric HL_8C3A_022 NA | |
| HL_4V8P_189 | 1/F1/1429:1434 | GNRA | homologous HL_5TBW_030 NA | |
| HL_4V8P_190 | 1/F1/1488:1496 | T-loop with 2 stacked bulged bases | homologous HL_5TBW_031 NA | |
| HL_4V8P_191 | 1/F1/1532:1538 | Pseudoknot geometry with 3' bulge | homologous HL_5TBW_032 NA | |
| HL_4V8P_192 | 1/F1/1569:1576 | GNRA with extra cWW | geometric HL_7A0S_056 HL_04259.1 | |
| HL_4V8P_194 | 1/F1/1624:1633 | No text annotation | homologous HL_8C3A_035 NA | |
| HL_4V8P_195 | 1/F1/1658:1663 | GNRA | homologous HL_5TBW_036 NA | |
| HL_4V8P_196 | 1/F1/1704:1712 | No text annotation | homologous HL_8C3A_037 NA | |
| HL_4V8P_197 | 1/F1/1743:1749 | No text annotation | homologous HL_8C3A_038 NA | |
| HL_4V8P_199 | 1/F1/1818:1822 | No text annotation | homologous HL_8C3A_040 NA | |
| HL_4V8P_200 | 1/F1/1868:1875 | No text annotation | homologous HL_5TBW_041 NA | |
| HL_4V8P_201 | 1/F1/1886:1892 | GNRA | homologous HL_5TBW_042 NA | |
| HL_4V8P_202 | 1/F1/1947:1952 | UNCG | homologous HL_5TBW_043 NA | |
| HL_4V8P_204 | 1/F1/2106:2110 | No text annotation | homologous HL_8C3A_045 NA | |
| HL_4V8P_205 | 1/F1/2131:2141 | No text annotation | homologous HL_5TBW_046 NA | |
| HL_4V8P_206 | 1/F1/2160:2165 | GNRA | homologous HL_8C3A_047 NA | |
| HL_4V8P_207 | 1/F1/2214:2221 | No text annotation | geometric HL_6CF2_001 HL_39454.2 | |
| HL_4V8P_208 | 1/F1/2249:2257 | No text annotation | ||
| HL_4V8P_209 | 1/F1/2287:2295 | No text annotation | homologous HL_5TBW_050 NA | |
| HL_4V8P_210 | 1/F1/2364:2373 | No text annotation | homologous HL_8C3A_051 NA | |
| HL_4V8P_212 | 1/F1/2531:2536 | GNRA | geometric HL_4QLM_001 HL_37824.5 | |
| HL_4V8P_213 | 1/F1/2558:2561 | No text annotation | homologous HL_8C3A_054 NA | |
| HL_4V8P_214 | 1/F1/2605:2613 | No text annotation | homologous HL_5TBW_054 NA | |
| HL_4V8P_215 | 1/F1/2622:2634 | No text annotation | homologous HL_8C3A_056 NA | |
| HL_4V8P_216 | 1/F1/2662:2670 | No text annotation | homologous HL_5TBW_056 NA | |
| HL_4V8P_217 | 1/F1/2682:2689 | Pseudoknot geometry | homologous HL_5TBW_057 NA | |
| HL_4V8P_329 | 1/F1/2714:2720 | No text annotation | ||
| HL_4V8P_219 | 1/F1/2733:2738 | GNRA | homologous HL_8C3A_060 NA | |
| HL_4V8P_220 | 1/F1/2764:2772 | Pseudoknot geometry | homologous HL_5TBW_060 NA | |
| HL_4V8P_221 | 1/F1/2828:2836 | No text annotation | homologous HL_5TBW_061 NA | |
| HL_4V8P_222 | 1/F1/2885:2892 | No text annotation | homologous HL_5TBW_062 NA | |
| HL_4V8P_223 | 1/F1/2908:2914 | No text annotation | geometric HL_5TBW_063 NA | |
| HL_4V8P_224 | 1/F1/2951:2956 | GNRA | homologous HL_8C3A_065 NA | |
| HL_4V8P_225 | 1/F1/3014:3019 | GNRA | geometric HL_5B2T_003 NA | |
| HL_4V8P_226 | 1/F1/3057:3062 | Ribsomal LSU H95 | homologous HL_8C3A_067 NA | |
| HL_4V8P_227 | 1/F1/3099:3113 | No text annotation | homologous HL_5TBW_067 NA | |
| HL_4V8P_228 | 1/F1/3161:3178 | Mini UNCG | geometric HL_4OOG_001 HL_56334.1 | |
| HL_4V8P_229 | 1/F1/3202:3209 | UNCG | geometric HL_4LGT_001 HL_34617.3 | |
| HL_4V8P_230 | 1/F1/3263:3271 | No text annotation | geometric HL_5TBW_070 NA | |
| HL_4V8P_232 | 1/G2/50:59 | No text annotation | geometric HL_7RQB_001 NA | |
| HL_4V8P_233 | 1/G2/72:90 | No text annotation | homologous HL_8C3A_230 NA | |
| HL_4V8P_234 | 1/G2/109:115 | No text annotation | homologous HL_5TBW_075 NA | |
| HL_4V8P_318 | 1/G2/122:129 | GNRA wlth tandem sheared | geometric HL_3HHN_010 HL_81538.1 | |
| HL_4V8P_319 | 1/G3/32:45 | No text annotation | homologous HL_4V9F_074 HL_97756.2 | |
| HL_4V8P_236 | 1/G3/36:41 | No text annotation | homologous HL_5J7L_203 HL_47787.1 | |
| HL_4V8P_237 | 1/G3/86:91 | GNRA | homologous HL_5TBW_186 NA | |
| HL_4V8P_238 | 1/H1/36:43 | No text annotation | geometric HL_4WF9_006 HL_30068.1 | |
| HL_4V8P_239 | 1/H1/67:72 | No text annotation | homologous HL_5TBW_002 NA | |
| HL_4V8P_240 | 1/H1/88:94 | No text annotation | homologous HL_8C3A_003 NA | |
| HL_4V8P_241 | 1/H1/130:136 | No text annotation | homologous HL_8C3A_004 NA | |
| HL_4V8P_242 | 1/H1/194:201 | T-loop with 2 stacked bulged bases | homologous HL_5TBW_005 NA | |
| HL_4V8P_243 | 1/H1/208:212 | No text annotation | homologous HL_5TBW_006 NA | |
| HL_4V8P_244 | 1/H1/216:224 | T-loop with unstacked turn | homologous HL_5TBW_007 NA | |
| HL_4V8P_245 | 1/H1/277:286 | No text annotation | homologous HL_8C3A_008 NA | |
| HL_4V8P_246 | 1/H1/302:311 | Pseudoknot geometry | homologous HL_5TBW_009 NA | |
| HL_4V8P_247 | 1/H1/356:361 | GNRA | homologous HL_8C3A_010 NA | |
| HL_4V8P_248 | 1/H1/381:386 | GNRA | homologous HL_5TBW_011 NA | |
| HL_4V8P_249 | 1/H1/486:493 | GNRA wlth tandem sheared | geometric HL_5J7L_154 HL_81538.1 | |
| HL_4V8P_250 | 1/H1/582:587 | GNRA | geometric HL_5TBW_017 NA | |
| HL_4V8P_330 | 1/H1/627:630 | No text annotation | ||
| HL_4V8P_252 | 1/H1/664:673 | T-loop with 2 stacked bulged bases | homologous HL_5TBW_014 NA | |
| HL_4V8P_320 | 1/H1/711:718 | No text annotation | geometric HL_2ZZM_002 HL_13963.2 | |
| HL_4V8P_255 | 1/H1/757:762 | GNRA | homologous HL_5TBW_017 NA | |
| HL_4V8P_256 | 1/H1/788:792 | Mini UNCG | geometric HL_5J7L_204 HL_46878.1 | |
| HL_4V8P_257 | 1/H1/869:874 | GNRA | homologous HL_8C3A_019 NA | |
| HL_4V8P_258 | 1/H1/901:910 | No text annotation | homologous HL_8C3A_020 NA | |
| HL_4V8P_259 | 1/H1/935:943 | No text annotation | homologous HL_8C3A_021 NA | |
| HL_4V8P_260 | 1/H1/983:988 | Externally structured | homologous HL_5TBW_022 NA | |
| HL_4V8P_261 | 1/H1/1050:1054 | No text annotation | ||
| HL_4V8P_262 | 1/H1/1104:1111 | No text annotation | homologous HL_8C3A_024 NA | |
| HL_4V8P_263 | 1/H1/1153:1159 | GNRA | homologous HL_5TBW_025 NA | |
| HL_4V8P_264 | 1/H1/1175:1182 | No text annotation | homologous HL_5TBW_026 NA | |
| HL_4V8P_265 | 1/H1/1374:1384 | Externally structured | geometric HL_8C3A_022 NA | |
| HL_4V8P_266 | 1/H1/1429:1434 | GNRA | homologous HL_5TBW_030 NA | |
| HL_4V8P_267 | 1/H1/1488:1496 | T-loop with 2 stacked bulged bases | homologous HL_5TBW_031 NA | |
| HL_4V8P_268 | 1/H1/1532:1538 | Pseudoknot geometry with 3' bulge | homologous HL_5TBW_032 NA | |
| HL_4V8P_269 | 1/H1/1569:1576 | GNRA with extra cWW | geometric HL_7A0S_056 HL_04259.1 | |
| HL_4V8P_271 | 1/H1/1624:1633 | No text annotation | homologous HL_8C3A_035 NA | |
| HL_4V8P_272 | 1/H1/1658:1663 | GNRA | homologous HL_5TBW_036 NA | |
| HL_4V8P_273 | 1/H1/1704:1712 | No text annotation | homologous HL_8C3A_037 NA | |
| HL_4V8P_274 | 1/H1/1743:1749 | No text annotation | homologous HL_8C3A_038 NA | |
| HL_4V8P_276 | 1/H1/1818:1822 | No text annotation | homologous HL_8C3A_040 NA | |
| HL_4V8P_277 | 1/H1/1868:1875 | No text annotation | homologous HL_5TBW_041 NA | |
| HL_4V8P_278 | 1/H1/1886:1892 | GNRA | homologous HL_8C3A_042 NA | |
| HL_4V8P_279 | 1/H1/1947:1952 | UNCG | homologous HL_5TBW_043 NA | |
| HL_4V8P_281 | 1/H1/2106:2110 | No text annotation | homologous HL_8C3A_045 NA | |
| HL_4V8P_282 | 1/H1/2131:2141 | No text annotation | homologous HL_5TBW_046 NA | |
| HL_4V8P_283 | 1/H1/2160:2165 | GNRA | homologous HL_8C3A_047 NA | |
| HL_4V8P_284 | 1/H1/2214:2221 | No text annotation | geometric HL_6CF2_001 HL_39454.2 | |
| HL_4V8P_286 | 1/H1/2287:2295 | No text annotation | homologous HL_5TBW_050 NA | |
| HL_4V8P_287 | 1/H1/2364:2373 | No text annotation | homologous HL_8C3A_051 NA | |
| HL_4V8P_289 | 1/H1/2531:2536 | GNRA | geometric HL_4QLM_001 HL_37824.5 | |
| HL_4V8P_290 | 1/H1/2558:2561 | No text annotation | homologous HL_8C3A_054 NA | |
| HL_4V8P_291 | 1/H1/2605:2613 | No text annotation | homologous HL_5TBW_054 NA | |
| HL_4V8P_292 | 1/H1/2622:2634 | No text annotation | homologous HL_8C3A_056 NA | |
| HL_4V8P_293 | 1/H1/2662:2670 | No text annotation | homologous HL_5TBW_056 NA | |
| HL_4V8P_294 | 1/H1/2682:2689 | Pseudoknot geometry | homologous HL_5TBW_057 NA | |
| HL_4V8P_332 | 1/H1/2714:2720 | No text annotation | ||
| HL_4V8P_296 | 1/H1/2733:2738 | GNRA | homologous HL_8C3A_060 NA | |
| HL_4V8P_297 | 1/H1/2764:2772 | Pseudoknot geometry | homologous HL_5TBW_060 NA | |
| HL_4V8P_298 | 1/H1/2828:2836 | No text annotation | homologous HL_5TBW_061 NA | |
| HL_4V8P_299 | 1/H1/2885:2892 | No text annotation | homologous HL_5TBW_062 NA | |
| HL_4V8P_300 | 1/H1/2908:2914 | No text annotation | geometric HL_5TBW_063 NA | |
| HL_4V8P_301 | 1/H1/2951:2956 | GNRA | homologous HL_8C3A_065 NA | |
| HL_4V8P_302 | 1/H1/3014:3019 | GNRA | geometric HL_5B2T_003 NA | |
| HL_4V8P_303 | 1/H1/3057:3062 | Ribsomal LSU H95 | homologous HL_8C3A_067 NA | |
| HL_4V8P_304 | 1/H1/3099:3113 | No text annotation | homologous HL_5TBW_067 NA | |
| HL_4V8P_305 | 1/H1/3161:3178 | Mini UNCG | geometric HL_4OOG_001 HL_56334.1 | |
| HL_4V8P_306 | 1/H1/3202:3209 | UNCG | geometric HL_4LGT_001 HL_34617.3 | |
| HL_4V8P_307 | 1/H1/3263:3271 | No text annotation | geometric HL_5TBW_070 NA | |
| HL_4V8P_308 | 1/H1/3306:3313 | No text annotation | geometric HL_3SKL_006 NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_4V8P_014 | UNCG | ||
| HL_4V8P_016 | No text annotation | ||
| HL_4V8P_024 | No text annotation | ||
| HL_4V8P_033 | No text annotation | ||
| HL_4V8P_322 | No text annotation | ||
| HL_4V8P_038 | No text annotation | ||
| HL_4V8P_043 | No text annotation | ||
| HL_4V8P_051 | No text annotation | ||
| HL_4V8P_058 | No text annotation | ||
| HL_4V8P_075 | No text annotation | ||
| HL_4V8P_081 | No text annotation | ||
| HL_4V8P_097 | UNCG | ||
| HL_4V8P_099 | No text annotation | ||
| HL_4V8P_116 | No text annotation | ||
| HL_4V8P_121 | No text annotation | ||
| HL_4V8P_126 | No text annotation | ||
| HL_4V8P_134 | No text annotation | ||
| HL_4V8P_141 | No text annotation | ||
| HL_4V8P_154 | No text annotation | ||
| HL_4V8P_158 | No text annotation | ||
| HL_4V8P_174 | UNCG | ||
| HL_4V8P_176 | No text annotation | ||
| HL_4V8P_184 | No text annotation | ||
| HL_4V8P_193 | No text annotation | ||
| HL_4V8P_328 | No text annotation | ||
| HL_4V8P_198 | No text annotation | ||
| HL_4V8P_203 | No text annotation | ||
| HL_4V8P_211 | No text annotation | ||
| HL_4V8P_218 | No text annotation | ||
| HL_4V8P_231 | No text annotation | ||
| HL_4V8P_235 | No text annotation | ||
| HL_4V8P_251 | UNCG | ||
| HL_4V8P_253 | No text annotation | ||
| HL_4V8P_254 | GNRA | ||
| HL_4V8P_270 | No text annotation | ||
| HL_4V8P_331 | No text annotation | ||
| HL_4V8P_275 | No text annotation | ||
| HL_4V8P_280 | No text annotation | ||
| HL_4V8P_285 | No text annotation | ||
| HL_4V8P_288 | No text annotation | ||
| HL_4V8P_295 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_4V8P_001 | 1/A1/6:7, 1/B2/147:149 | Single bulged C | homologous IL_8C3A_002 NA | |
| IL_4V8P_002 | 1/A1/25:26, 1/A1/54:56 | Single stack bend | homologous IL_5TBW_004 NA | |
| IL_4V8P_003 | 1/A1/29:36, 1/A1/43:51 | 9x8 Sarcin-Ricin; G-bulge | geometric IL_4WF9_008 IL_84694.1 | |
| IL_4V8P_004 | 1/A1/80:87, 1/A1/95:101 | No text annotation | homologous IL_8C3A_006 NA | |
| IL_4V8P_005 | 1/A1/121:122, 1/A1/144:149 | No text annotation | homologous IL_8C3A_007 NA | |
| IL_4V8P_006 | 1/A1/125:128, 1/A1/138:141 | Double sheared | geometric IL_4LFB_060 IL_09705.13 | |
| IL_4V8P_007 | 1/A1/158:159, 1/A1/260:262 | Single bulged U | geometric IL_5J7L_334 IL_89505.2 | |
| IL_4V8P_008 | 1/A1/162:165, 1/A1/254:257 | Double sheared | geometric IL_3D0U_002 IL_09705.13 | |
| IL_4V8P_009 | 1/A1/167:171, 1/A1/248:252 | No text annotation | ||
| IL_4V8P_010 | 1/A1/173:175, 1/A1/245:246 | Single stack bend | geometric IL_5TBW_004 NA | |
| IL_4V8P_011 | 1/A1/177:178, 1/A1/240:243 | Multiple bulged bases | geometric IL_7V9E_001 IL_82107.2 | |
| IL_4V8P_012 | 1/A1/189:191, 1/A1/204:205 | Single bulged U | homologous IL_8C3A_013 NA | |
| IL_4V8P_013 | 1/A1/336:338, 1/B2/28:29 | Single bulged A | homologous IL_5TBW_013 NA | |
| IL_4V8P_014 | 1/A1/375:378, 1/A1/389:400 | No text annotation | homologous IL_5TBW_014 NA | |
| IL_4V8P_015 | 1/A1/401:407, 1/B2/16:22 | Triple sheared with non-canonical cWW | homologous IL_5TBW_015 NA | |
| IL_4V8P_016 | 1/A1/422:424, 1/A1/656:658 | Isolated non-canonical cWW pair | geometric IL_4E48_001 IL_10289.2 | |
| IL_4V8P_582 | 1/A1/430:435, 1/A1/647:650 | No text annotation | ||
| IL_4V8P_018 | 1/A1/443:445, 1/A1/532:534 | Isolated non-canonical cWW pair | geometric IL_2R8S_001 IL_10289.2 | |
| IL_4V8P_019 | 1/A1/449:455, 1/A1/523:528 | No text annotation | ||
| IL_4V8P_020 | 1/A1/457:462, 1/A1/516:521 | No text annotation | ||
| IL_4V8P_021 | 1/A1/466:468, 1/A1/511:512 | Single stack bend | geometric IL_4V83_236 IL_06586.2 | |
| IL_4V8P_022 | 1/A1/469:470, 1/A1/507:510 | Major groove minor groove platform; mini C-loop | geometric IL_1I6U_002 IL_68140.2 | |
| IL_4V8P_583 | 1/A1/469:472, 1/A1/506:510 | No text annotation | ||
| IL_4V8P_023 | 1/A1/470:472, 1/A1/506:507 | Minor groove platform | geometric IL_4V88_412 NA | |
| IL_4V8P_024 | 1/A1/473:474, 1/A1/503:505 | Major groove platform | geometric IL_4WF9_078 IL_48076.4 | |
| IL_4V8P_025 | 1/A1/475:479, 1/A1/499:502 | UAA/GAN variation | geometric IL_2R8S_002 IL_77691.4 | |
| IL_4V8P_026 | 1/A1/484:486, 1/A1/493:494 | Single bulged A | geometric IL_6WPI_001 IL_31462.3 | |
| IL_4V8P_027 | 1/A1/555:557, 1/A1/610:612 | Isolated cWS basepair | geometric IL_4WF9_034 NA | |
| IL_4V8P_028 | 1/A1/562:569, 1/A1/600:605 | No text annotation | ||
| IL_4V8P_029 | 1/A1/571:574, 1/A1/594:598 | UAA/GAN related | geometric IL_3IGI_009 IL_77691.4 | |
| IL_4V8P_030 | 1/A1/577:580, 1/A1/589:591 | Isolated non-canonical cWW pair | geometric IL_4K31_003 IL_37047.1 | |
| IL_4V8P_031 | 1/A1/689:691, 1/A1/820:822 | Isolated non-canonical cWW pair | geometric IL_1UN6_005 IL_10289.2 | |
| IL_4V8P_032 | 1/A1/704:708, 1/A1/721:725 | No text annotation | ||
| IL_4V8P_033 | 1/A1/751:755, 1/A1/764:769 | Triple sheared related | geometric IL_5J7L_063 IL_80231.1 | |
| IL_4V8P_034 | 1/A1/776:777, 1/A1/804:806 | Single bulged A | homologous IL_5TBW_024 NA | |
| IL_4V8P_035 | 1/A1/779:780, 1/A1/800:802 | Minor groove platform | geometric IL_4R4V_001 IL_92540.1 | |
| IL_4V8P_036 | 1/A1/781:786, 1/A1/794:799 | No text annotation | ||
| IL_4V8P_037 | 1/A1/828:830, 1/A1/963:965 | Isolated non-canonical cWW pair | geometric IL_5TBW_027 NA | |
| IL_4V8P_038 | 1/A1/830:834, 1/A1/956:963 | tHW-tHW cross-strand stack | homologous IL_5TBW_028 NA | |
| IL_4V8P_039 | 1/A1/853:854, 1/A1/920:922 | Single bulged A | homologous IL_8C3A_031 NA | |
| IL_4V8P_040 | 1/A1/858:863, 1/A1/880:886 | Quadruple sheared | geometric IL_3FTF_001 IL_06136.2 | |
| IL_4V8P_041 | 1/A1/894:897, 1/A1/913:915 | Major groove platform with extra cWW | homologous IL_8C3A_034 NA | |
| IL_4V8P_042 | 1/A1/898:900, 1/A1/911:912 | Single bulged U | homologous IL_8C3A_035 NA | |
| IL_4V8P_043 | 1/A1/932:934, 1/A1/944:948 | Multiple bulged bases | geometric IL_5TBW_033 NA | |
| IL_4V8P_044 | 1/A1/979:981, 1/A1/990:992 | Isolated non-canonical cWW pair | homologous IL_5TBW_034 NA | |
| IL_4V8P_045 | 1/A1/994:995, 1/A1/1138:1140 | Single stack bend | homologous IL_5TBW_035 NA | |
| IL_4V8P_046 | 1/A1/1001:1007, 1/A1/1129:1132 | No text annotation | ||
| IL_4V8P_047 | 1/A1/1009:1011, 1/A1/1126:1127 | Single bulged G | homologous IL_8C3A_040 NA | |
| IL_4V8P_048 | 1/A1/1018:1023, 1/A1/1078:1083 | 5x5 Sarcin-Ricin with intercalated A; G-bulge | geometric IL_7A0S_027 NA | |
| IL_4V8P_049 | 1/A1/1023:1024, 1/A1/1076:1078 | Minor groove platform | homologous IL_8C3A_042 NA | |
| IL_4V8P_050 | 1/A1/1025:1030, 1/A1/1072:1075 | C-loop | homologous IL_5TBW_040 NA | |
| IL_4V8P_051 | 1/A1/1032:1035, 1/A1/1067:1070 | Tandem non-canonical cWW pairs | geometric IL_5TBW_041 NA | |
| IL_4V8P_052 | 1/A1/1035:1037, 1/A1/1065:1067 | Isolated non-canonical cWW pair | homologous IL_8C3A_045 NA | |
| IL_4V8P_053 | 1/A1/1039:1042, 1/A1/1062:1063 | Multiple bulged bases | geometric IL_6IV9_001 IL_82107.2 | |
| IL_4V8P_054 | 1/A1/1094:1096, 1/A1/1117:1118 | Single bulged C | geometric IL_5J7L_276 IL_61258.14 | |
| IL_4V8P_055 | 1/A1/1101:1104, 1/A1/1111:1112 | Single bulged G | homologous IL_8C3A_048 NA | |
| IL_4V8P_056 | 1/A1/1147:1149, 1/A1/1163:1165 | Isolated non-canonical cWW pair | homologous IL_5TBW_046 NA | |
| IL_4V8P_058 | 1/A1/1193:1198, 1/A1/1355:1360 | UAA/GAN with extra cWW | geometric IL_4WF9_104 IL_49767.8 | |
| IL_4V8P_059 | 1/A1/1200:1207, 1/A1/1352:1353 | SSU/LSU pseudoknot | homologous IL_8C3A_052 NA | |
| IL_4V8P_060 | 1/A1/1207:1209, 1/A1/1351:1352 | Single bulged U | homologous IL_8C3A_053 NA | |
| IL_4V8P_061 | 1/A1/1214:1221, 1/A1/1341:1346 | No text annotation | geometric IL_5TBW_051 NA | |
| IL_4V8P_062 | 1/A1/1221:1232, 1/A1/1326:1341 | No text annotation | geometric IL_5TBW_052 NA | |
| IL_4V8P_063 | 1/A1/1234:1236, 1/A1/1323:1324 | Single bulged U | homologous IL_8C3A_056 NA | |
| IL_4V8P_584 | 1/A1/1245:1253, 1/A1/1310:1314 | No text annotation | homologous IL_8P9A_282 IL_99692.1 | |
| IL_4V8P_065 | 1/A1/1403:1405, 1/A1/1454:1457 | Isolated cWS basepair | homologous IL_5TBW_057 NA | |
| IL_4V8P_066 | 1/A1/1414:1421, 1/A1/1441:1445 | Kink-turn | homologous IL_5TBW_059 NA | |
| IL_4V8P_067 | 1/A1/1424:1426, 1/A1/1437:1438 | Single bulged A | homologous IL_5TBW_060 NA | |
| IL_4V8P_068 | 1/A1/1470:1476, 1/A1/2349:2354 | 7x6 Sarcin-Ricin; G-bulge | homologous IL_5TBW_061 NA | |
| IL_4V8P_069 | 1/A1/1518:1521, 1/A1/1859:1860 | Major groove platform; stack outside cWW | geometric IL_4V9F_050 IL_50694.5 | |
| IL_4V8P_070 | 1/A1/1527:1531, 1/A1/1539:1541 | Minor groove platform | geometric IL_4LFB_037 IL_47078.2 | |
| IL_4V8P_071 | 1/A1/1558:1562, 1/A1/1610:1615 | UAA/GAN | homologous IL_5TBW_063 NA | |
| IL_4V8P_072 | 1/A1/1585:1589, 1/A1/1604:1606 | No text annotation | ||
| IL_4V8P_073 | 1/A1/1643:1645, 1/A1/1849:1850 | Single stack bend | geometric IL_4LFB_041 IL_06586.2 | |
| IL_4V8P_074 | 1/A1/1648:1651, 1/A1/1843:1846 | No text annotation | ||
| IL_4V8P_075 | 1/A1/1685:1687, 1/A1/1812:1814 | Isolated non-canonical cWW pair | homologous IL_8C3A_074 NA | |
| IL_4V8P_076 | 1/A1/1693:1694, 1/A1/1804:1806 | Single bulged C | homologous IL_8C3A_075 NA | |
| IL_4V8P_077 | 1/A1/1694:1695, 1/A1/1802:1804 | Single stack bend | geometric IL_4WF9_007 IL_06586.2 | |
| IL_4V8P_078 | 1/A1/1718:1722, 1/A1/1772:1777 | No text annotation | homologous IL_8C3A_077 NA | |
| IL_4V8P_079 | 1/A1/1726:1730, 1/A1/1763:1768 | No text annotation | ||
| IL_4V8P_080 | 1/A1/1733:1734, 1/A1/1758:1760 | No text annotation | ||
| IL_4V8P_081 | 1/A1/1735:1741, 1/A1/1751:1757 | Kink-turn | homologous IL_5TBW_073 NA | |
| IL_4V8P_082 | 1/A1/1907:1913, 1/A1/2341:2344 | No text annotation | homologous IL_8C3A_080 NA | |
| IL_4V8P_083 | 1/A1/1919:1921, 1/A1/2333:2335 | Isolated tWW turn | homologous IL_5TBW_075 NA | |
| IL_4V8P_084 | 1/A1/1922:1925, 1/A1/2331:2332 | Major groove platform; stack outside cWW | geometric IL_5TBW_076 NA | |
| IL_4V8P_585 | 1/A1/1922:1930, 1/A1/2328:2332 | No text annotation | homologous IL_8P9A_305 IL_22854.3 | |
| IL_4V8P_085 | 1/A1/1925:1930, 1/A1/2328:2331 | No text annotation | homologous IL_8C3A_083 NA | |
| IL_4V8P_086 | 1/A1/1942:1947, 1/A1/1952:1958 | No text annotation | homologous IL_8C3A_084 NA | |
| IL_4V8P_087 | 1/A1/1964:1966, 1/A1/2102:2104 | Isolated non-canonical cWW pair | homologous IL_5TBW_079 NA | |
| IL_4V8P_088 | 1/A1/2124:2125, 1/A1/2318:2320 | Single bulged A | homologous IL_5TBW_082 NA | |
| IL_4V8P_089 | 1/A1/2152:2157, 1/A1/2168:2175 | Kink-turn related | homologous IL_5TBW_083 NA | |
| IL_4V8P_090 | 1/A1/2191:2194, 1/A1/2240:2241 | Major groove intercalation | homologous IL_5TBW_084 NA | |
| IL_4V8P_091 | 1/A1/2195:2196, 1/A1/2236:2239 | Major groove intercalation | geometric IL_7A0S_067 IL_66635.4 | |
| IL_4V8P_092 | 1/A1/2199:2201, 1/A1/2232:2233 | Single bulged U | geometric IL_2A64_002 IL_89505.2 | |
| IL_4V8P_093 | 1/A1/2201:2205, 1/A1/2230:2232 | Other IL | geometric IL_4PDB_001 IL_36516.2 | |
| IL_4V8P_094 | 1/A1/2206:2212, 1/A1/2223:2229 | No text annotation | homologous IL_5TBW_088 NA | |
| IL_4V8P_095 | 1/A1/2271:2272, 1/A1/2302:2305 | Bulged stacked bases | geometric IL_5TBW_089 NA | |
| IL_4V8P_096 | 1/A1/2272:2283, 1/A1/2299:2302 | No text annotation | homologous IL_8C3A_095 NA | |
| IL_4V8P_097 | 1/A1/2386:2389, 1/A1/2974:2976 | Major groove platform with extra pair | homologous IL_5TBW_091 NA | |
| IL_4V8P_098 | 1/A1/2391:2393, 1/A1/2969:2972 | No text annotation | homologous IL_8C3A_097 NA | |
| IL_4V8P_099 | 1/A1/2404:2406, 1/A1/2799:2800 | Single bulged U | homologous IL_5TBW_093 NA | |
| IL_4V8P_100 | 1/A1/2407:2408, 1/A1/2795:2798 | Minor groove platform | homologous IL_5TBW_094 NA | |
| IL_4V8P_101 | 1/A1/2418:2421, 1/A1/2592:2596 | No text annotation | geometric IL_3NPQ_006 IL_86374.1 | |
| IL_4V8P_103 | 1/A1/2515:2521, 1/A1/2573:2576 | No text annotation | homologous IL_8C3A_106 NA | |
| IL_4V8P_104 | 1/A1/2557:2558, 1/A1/2561:2563 | Single bulged U | geometric IL_2PN3_003 IL_89505.2 | |
| IL_4V8P_105 | 1/A1/2603:2604, 1/A1/2614:2616 | Single bulged A | homologous IL_8C3A_107 NA | |
| IL_4V8P_106 | 1/A1/2655:2657, 1/A1/2675:2679 | No text annotation | homologous IL_8C3A_108 NA | |
| IL_4V8P_107 | 1/A1/2707:2710, 1/A1/2724:2727 | Tandem non-canonical cWW pairs | homologous IL_8C3A_109 NA | |
| IL_4V8P_108 | 1/A1/2758:2760, 1/A1/2775:2777 | Isolated non-canonical cWW pair | geometric IL_5AOX_001 IL_10289.2 | |
| IL_4V8P_109 | 1/A1/2760:2762, 1/A1/2774:2775 | Single bulged U | geometric IL_4V9F_107 IL_89505.2 | |
| IL_4V8P_110 | 1/A1/2811:2812, 1/A1/2853:2855 | Major groove platform | geometric IL_5TBW_102 NA | |
| IL_4V8P_111 | 1/A1/2812:2814, 1/A1/2851:2853 | Isolated non-canonical cWW pair | geometric IL_5TBW_103 NA | |
| IL_4V8P_112 | 1/A1/2814:2816, 1/A1/2850:2851 | Major groove platform | homologous IL_8C3A_112 NA | |
| IL_4V8P_113 | 1/A1/2816:2818, 1/A1/2846:2850 | Major groove minor groove platform with extra cWW | homologous IL_8C3A_113 NA | |
| IL_4V8P_114 | 1/A1/2823:2827, 1/A1/2837:2841 | No text annotation | homologous IL_8C3A_114 NA | |
| IL_4V8P_115 | 1/A1/2864:2865, 1/A1/2937:2939 | Major groove platform | homologous IL_5TBW_107 NA | |
| IL_4V8P_116 | 1/A1/2867:2869, 1/A1/2931:2935 | No text annotation | homologous IL_8C3A_116 NA | |
| IL_4V8P_117 | 1/A1/2869:2870, 1/A1/2928:2931 | Multiple bulged bases | homologous IL_5TBW_109 NA | |
| IL_4V8P_118 | 1/A1/2879:2880, 1/A1/2897:2900 | Major groove platform with intercalation | homologous IL_5TBW_111 NA | |
| IL_4V8P_119 | 1/A1/2906:2908, 1/A1/2914:2916 | Isolated non-canonical cWW pair | homologous IL_8C3A_120 NA | |
| IL_4V8P_120 | 1/A1/2948:2949, 1/A1/2958:2960 | Single bulged A | homologous IL_8C3A_122 NA | |
| IL_4V8P_121 | 1/A1/2993:2996, 1/A1/3128:3133 | Double sheared | homologous IL_8C3A_123 NA | |
| IL_4V8P_122 | 1/A1/3007:3014, 1/A1/3019:3025 | 8x7 Sarcin-Ricin; G-bulge | geometric IL_5TBW_116 NA | |
| IL_4V8P_123 | 1/A1/3036:3040, 1/A1/3080:3083 | Major groove minor groove platform with tHH | homologous IL_8C3A_126 NA | |
| IL_4V8P_124 | 1/A1/3043:3048, 1/A1/3073:3077 | UAA/GAN related | homologous IL_8C3A_127 NA | |
| IL_4V8P_125 | 1/A1/3052:3053, 1/A1/3066:3069 | Multiple bulged bases | homologous IL_5TBW_119 NA | |
| IL_4V8P_126 | 1/A1/3092:3096, 1/A1/3116:3120 | UAA/GAN | homologous IL_5TBW_120 NA | |
| IL_4V8P_127 | 1/A1/3144:3146, 1/A1/3247:3248 | Single bulged U | geometric IL_7A0S_075 IL_89505.2 | |
| IL_4V8P_128 | 1/A1/3158:3160, 1/A1/3179:3180 | Single bulged A | geometric IL_3MJA_001 IL_31462.3 | |
| IL_4V8P_607 | 1/A1/3184:3186, 1/A1/3224:3225 | No text annotation | ||
| IL_4V8P_129 | 1/A1/3189:3193, 1/A1/3217:3221 | Triple sheared | geometric IL_3IGI_002 IL_50730.1 | |
| IL_4V8P_130 | 1/A1/3195:3199, 1/A1/3212:3215 | UAA/GAN variation | geometric IL_4LFB_062 IL_77691.4 | |
| IL_4V8P_131 | 1/A1/3260:3263, 1/A1/3271:3274 | Tandem non-canonical cWW pairs | geometric IL_5TBW_129 NA | |
| IL_4V8P_132 | 1/A1/3281:3282, 1/A1/3338:3340 | Minor groove platform related | geometric IL_7TZS_003 IL_92540.1 | |
| IL_4V8P_133 | 1/A1/3286:3288, 1/A1/3329:3334 | No text annotation | homologous IL_8C3A_138 NA | |
| IL_4V8P_134 | 1/A1/3290:3295, 1/A1/3323:3327 | No text annotation | homologous IL_5TBW_133 NA | |
| IL_4V8P_135 | 1/A1/3297:3299, 1/A1/3320:3321 | Single bulged U | geometric IL_3MEI_001 IL_89505.2 | |
| IL_4V8P_136 | 1/A1/3300:3303, 1/A1/3316:3319 | Double sheared; A in syn | homologous IL_8C3A_141 NA | |
| IL_4V8P_137 | 1/B2/67:69, 1/B2/94:97 | Isolated non-canonical cWW pair | homologous IL_5TBW_145 NA | |
| IL_4V8P_138 | 1/B2/71:72, 1/B2/90:92 | Single bulged U | homologous IL_5TBW_146 NA | |
| IL_4V8P_139 | 1/B3/15:16, 1/B3/62:64 | Single bulged A | homologous IL_5TBW_372 NA | |
| IL_4V8P_140 | 1/B3/21:26, 1/B3/56:57 | No text annotation | ||
| IL_4V8P_586 | 1/B3/21:27, 1/B3/52:57 | No text annotation | homologous IL_8P9A_365 IL_45841.1 | |
| IL_4V8P_141 | 1/B3/26:27, 1/B3/52:56 | No text annotation | ||
| IL_4V8P_142 | 1/B3/28:29, 1/B3/48:51 | Major groove minor groove platform; mini C-loop | homologous IL_5J7L_357 IL_68140.2 | |
| IL_4V8P_143 | 1/B3/32:36, 1/B3/41:45 | Symmetric double minor groove platform | geometric IL_4V9F_104 IL_58103.10 | |
| IL_4V8P_144 | 1/B3/71:78, 1/B3/98:104 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_5TBW_377 NA | |
| IL_4V8P_145 | 1/B3/82:85, 1/B3/92:94 | Isolated non-canonical cWW pair | homologous IL_5TBW_378 NA | |
| IL_4V8P_146 | 1/C2/16:22, 1/D1/401:407 | Triple sheared with non-canonical cWW | homologous IL_5TBW_015 NA | |
| IL_4V8P_147 | 1/C2/28:29, 1/D1/336:338 | Single bulged A | homologous IL_5TBW_013 NA | |
| IL_4V8P_587 | 1/C2/67:69, 1/C2/94:97 | No text annotation | homologous IL_8P9A_371 IL_31091.1 | |
| IL_4V8P_149 | 1/C2/71:72, 1/C2/90:92 | Single bulged U | homologous IL_5TBW_146 NA | |
| IL_4V8P_150 | 1/C2/147:149, 1/D1/6:7 | Single bulged U | geometric IL_3MEI_001 IL_89505.2 | |
| IL_4V8P_151 | 1/C3/15:16, 1/C3/62:64 | Single bulged A | homologous IL_5TBW_372 NA | |
| IL_4V8P_152 | 1/C3/21:26, 1/C3/56:57 | No text annotation | ||
| IL_4V8P_588 | 1/C3/21:27, 1/C3/52:57 | No text annotation | homologous IL_8P9A_365 IL_45841.1 | |
| IL_4V8P_153 | 1/C3/26:27, 1/C3/52:56 | C-loop | ||
| IL_4V8P_154 | 1/C3/28:29, 1/C3/48:51 | Major groove minor groove platform; mini C-loop | homologous IL_5J7L_357 IL_68140.2 | |
| IL_4V8P_155 | 1/C3/32:36, 1/C3/41:45 | Symmetric double minor groove platform | homologous IL_4V9F_104 IL_58103.10 | |
| IL_4V8P_156 | 1/C3/71:78, 1/C3/98:104 | 8x7 Sarcin-Ricin; G-bulge | ||
| IL_4V8P_157 | 1/C3/82:85, 1/C3/92:94 | Isolated non-canonical cWW pair | homologous IL_5TBW_378 NA | |
| IL_4V8P_158 | 1/D1/25:26, 1/D1/54:56 | Single stack bend | homologous IL_5TBW_004 NA | |
| IL_4V8P_159 | 1/D1/29:36, 1/D1/43:51 | 9x8 Sarcin-Ricin; G-bulge | ||
| IL_4V8P_160 | 1/D1/80:87, 1/D1/95:101 | 8x7 Sarcin-Ricin; G-bulge | ||
| IL_4V8P_161 | 1/D1/121:122, 1/D1/144:149 | No text annotation | geometric IL_5TBW_007 NA | |
| IL_4V8P_162 | 1/D1/125:128, 1/D1/138:141 | Double sheared | ||
| IL_4V8P_163 | 1/D1/158:159, 1/D1/260:262 | Single bulged U | geometric IL_5J7L_334 IL_89505.2 | |
| IL_4V8P_164 | 1/D1/162:165, 1/D1/254:257 | Double sheared | ||
| IL_4V8P_165 | 1/D1/167:171, 1/D1/248:252 | No text annotation | ||
| IL_4V8P_166 | 1/D1/173:175, 1/D1/245:246 | Single stack bend | geometric IL_5TBW_004 NA | |
| IL_4V8P_167 | 1/D1/177:178, 1/D1/240:243 | Multiple bulged bases | geometric IL_7V9E_001 IL_82107.2 | |
| IL_4V8P_168 | 1/D1/189:191, 1/D1/204:205 | Single bulged U | homologous IL_8C3A_013 NA | |
| IL_4V8P_169 | 1/D1/375:378, 1/D1/389:400 | No text annotation | homologous IL_5TBW_014 NA | |
| IL_4V8P_170 | 1/D1/422:424, 1/D1/656:658 | Isolated non-canonical cWW pair | geometric IL_4E48_001 IL_10289.2 | |
| IL_4V8P_590 | 1/D1/430:435, 1/D1/647:650 | No text annotation | ||
| IL_4V8P_172 | 1/D1/443:445, 1/D1/532:534 | Isolated non-canonical cWW pair | geometric IL_2R8S_001 IL_10289.2 | |
| IL_4V8P_173 | 1/D1/449:455, 1/D1/523:528 | No text annotation | ||
| IL_4V8P_174 | 1/D1/457:462, 1/D1/516:521 | No text annotation | ||
| IL_4V8P_175 | 1/D1/466:468, 1/D1/511:512 | Single stack bend | geometric IL_4V83_236 IL_06586.2 | |
| IL_4V8P_176 | 1/D1/469:470, 1/D1/507:510 | Major groove minor groove platform; mini C-loop | geometric IL_1I6U_002 IL_68140.2 | |
| IL_4V8P_591 | 1/D1/469:472, 1/D1/506:510 | No text annotation | ||
| IL_4V8P_177 | 1/D1/470:472, 1/D1/506:507 | Minor groove platform | ||
| IL_4V8P_178 | 1/D1/473:474, 1/D1/503:505 | Major groove platform | geometric IL_4WF9_078 IL_48076.4 | |
| IL_4V8P_179 | 1/D1/475:479, 1/D1/499:502 | UAA/GAN variation | ||
| IL_4V8P_180 | 1/D1/484:486, 1/D1/493:494 | Single bulged A | geometric IL_6WPI_001 IL_31462.3 | |
| IL_4V8P_181 | 1/D1/555:557, 1/D1/610:612 | Isolated cWS basepair | geometric IL_4WF9_034 NA | |
| IL_4V8P_182 | 1/D1/562:569, 1/D1/600:605 | No text annotation | ||
| IL_4V8P_183 | 1/D1/571:574, 1/D1/594:598 | UAA/GAN variation | ||
| IL_4V8P_184 | 1/D1/577:580, 1/D1/589:591 | Isolated non-canonical cWW pair | geometric IL_4K31_003 IL_37047.1 | |
| IL_4V8P_185 | 1/D1/689:691, 1/D1/820:822 | Isolated non-canonical cWW pair | geometric IL_1UN6_005 IL_10289.2 | |
| IL_4V8P_186 | 1/D1/704:708, 1/D1/721:725 | No text annotation | ||
| IL_4V8P_187 | 1/D1/751:755, 1/D1/764:769 | Triple sheared related | ||
| IL_4V8P_188 | 1/D1/776:777, 1/D1/804:806 | Single bulged A | homologous IL_5TBW_024 NA | |
| IL_4V8P_189 | 1/D1/779:780, 1/D1/800:802 | Minor groove platform | geometric IL_4R4V_001 IL_92540.1 | |
| IL_4V8P_190 | 1/D1/781:786, 1/D1/794:799 | No text annotation | ||
| IL_4V8P_191 | 1/D1/828:830, 1/D1/963:965 | Isolated non-canonical cWW pair | geometric IL_5TBW_027 NA | |
| IL_4V8P_192 | 1/D1/830:834, 1/D1/956:963 | tHW-tHW cross-strand stack | ||
| IL_4V8P_193 | 1/D1/853:854, 1/D1/920:922 | Single bulged A | homologous IL_8C3A_031 NA | |
| IL_4V8P_194 | 1/D1/858:863, 1/D1/880:886 | Quadruple sheared | geometric IL_3FTF_001 IL_06136.2 | |
| IL_4V8P_195 | 1/D1/894:897, 1/D1/913:915 | Major groove platform with extra cWW | homologous IL_8C3A_034 NA | |
| IL_4V8P_196 | 1/D1/898:900, 1/D1/911:912 | Single bulged U | homologous IL_8C3A_035 NA | |
| IL_4V8P_197 | 1/D1/932:934, 1/D1/944:948 | Multiple bulged bases | geometric IL_5TBW_033 NA | |
| IL_4V8P_198 | 1/D1/979:981, 1/D1/990:992 | Isolated non-canonical cWW pair | homologous IL_5TBW_034 NA | |
| IL_4V8P_199 | 1/D1/994:995, 1/D1/1138:1140 | Single stack bend | homologous IL_5TBW_035 NA | |
| IL_4V8P_200 | 1/D1/1001:1007, 1/D1/1129:1132 | No text annotation | ||
| IL_4V8P_201 | 1/D1/1009:1011, 1/D1/1126:1127 | Single bulged G | homologous IL_8C3A_040 NA | |
| IL_4V8P_202 | 1/D1/1018:1023, 1/D1/1078:1083 | 5x5 Sarcin-Ricin with intercalated A; G-bulge | geometric IL_7A0S_027 NA | |
| IL_4V8P_203 | 1/D1/1023:1024, 1/D1/1076:1078 | Minor groove platform | ||
| IL_4V8P_204 | 1/D1/1025:1030, 1/D1/1072:1075 | C-loop | homologous IL_5TBW_040 NA | |
| IL_4V8P_205 | 1/D1/1032:1035, 1/D1/1067:1070 | Tandem non-canonical cWW pairs | ||
| IL_4V8P_206 | 1/D1/1035:1037, 1/D1/1065:1067 | Isolated non-canonical cWW pair | homologous IL_5TBW_042 NA | |
| IL_4V8P_207 | 1/D1/1039:1042, 1/D1/1062:1063 | Minor groove platform | geometric IL_5T83_003 IL_92540.1 | |
| IL_4V8P_208 | 1/D1/1094:1096, 1/D1/1117:1118 | Single bulged C | geometric IL_5J7L_276 IL_61258.14 | |
| IL_4V8P_209 | 1/D1/1101:1104, 1/D1/1111:1112 | Multiple bulged bases | geometric IL_5WLH_001 IL_82107.2 | |
| IL_4V8P_210 | 1/D1/1147:1149, 1/D1/1163:1165 | Isolated non-canonical cWW pair | homologous IL_5TBW_046 NA | |
| IL_4V8P_212 | 1/D1/1193:1198, 1/D1/1355:1360 | UAA/GAN with extra cWW | geometric IL_4WF9_104 IL_49767.8 | |
| IL_4V8P_213 | 1/D1/1200:1207, 1/D1/1352:1353 | SSU/LSU pseudoknot | ||
| IL_4V8P_214 | 1/D1/1207:1209, 1/D1/1351:1352 | Single bulged U | homologous IL_8C3A_053 NA | |
| IL_4V8P_215 | 1/D1/1214:1221, 1/D1/1341:1346 | No text annotation | homologous IL_8C3A_054 NA | |
| IL_4V8P_216 | 1/D1/1221:1232, 1/D1/1326:1341 | No text annotation | geometric IL_5TBW_052 NA | |
| IL_4V8P_217 | 1/D1/1234:1236, 1/D1/1323:1324 | Single bulged U | homologous IL_8C3A_056 NA | |
| IL_4V8P_592 | 1/D1/1245:1253, 1/D1/1310:1314 | No text annotation | homologous IL_8P9A_282 IL_99692.1 | |
| IL_4V8P_219 | 1/D1/1403:1405, 1/D1/1454:1457 | Isolated cWS basepair | homologous IL_5TBW_057 NA | |
| IL_4V8P_220 | 1/D1/1414:1421, 1/D1/1441:1445 | Kink-turn | ||
| IL_4V8P_221 | 1/D1/1424:1426, 1/D1/1437:1438 | Single bulged A | homologous IL_5TBW_060 NA | |
| IL_4V8P_222 | 1/D1/1470:1476, 1/D1/2349:2354 | 7x6 Sarcin-Ricin; G-bulge | ||
| IL_4V8P_223 | 1/D1/1518:1521, 1/D1/1859:1860 | Major groove platform; stack outside cWW | geometric IL_4V9F_050 IL_50694.5 | |
| IL_4V8P_224 | 1/D1/1527:1531, 1/D1/1539:1541 | Minor groove platform | geometric IL_4LFB_037 IL_47078.2 | |
| IL_4V8P_225 | 1/D1/1558:1562, 1/D1/1610:1615 | UAA/GAN | ||
| IL_4V8P_226 | 1/D1/1585:1589, 1/D1/1604:1606 | No text annotation | ||
| IL_4V8P_227 | 1/D1/1643:1645, 1/D1/1849:1850 | Single stack bend | geometric IL_4LFB_041 IL_06586.2 | |
| IL_4V8P_228 | 1/D1/1648:1651, 1/D1/1843:1846 | No text annotation | ||
| IL_4V8P_229 | 1/D1/1685:1687, 1/D1/1812:1814 | Isolated non-canonical cWW pair | homologous IL_8C3A_074 NA | |
| IL_4V8P_230 | 1/D1/1693:1694, 1/D1/1804:1806 | Single bulged C | homologous IL_8C3A_075 NA | |
| IL_4V8P_231 | 1/D1/1694:1695, 1/D1/1802:1804 | Single stack bend | geometric IL_4WF9_007 IL_06586.2 | |
| IL_4V8P_232 | 1/D1/1718:1722, 1/D1/1772:1777 | No text annotation | homologous IL_8C3A_077 NA | |
| IL_4V8P_233 | 1/D1/1726:1730, 1/D1/1763:1768 | No text annotation | ||
| IL_4V8P_234 | 1/D1/1733:1734, 1/D1/1758:1760 | No text annotation | ||
| IL_4V8P_235 | 1/D1/1735:1741, 1/D1/1751:1757 | Kink-turn | ||
| IL_4V8P_236 | 1/D1/1907:1913, 1/D1/2341:2344 | No text annotation | homologous IL_8C3A_080 NA | |
| IL_4V8P_237 | 1/D1/1919:1921, 1/D1/2333:2335 | Isolated tWW turn | homologous IL_5TBW_075 NA | |
| IL_4V8P_238 | 1/D1/1922:1925, 1/D1/2331:2332 | Major groove platform; stack outside cWW | homologous IL_5TBW_076 NA | |
| IL_4V8P_593 | 1/D1/1922:1930, 1/D1/2328:2332 | No text annotation | homologous IL_8P9A_305 IL_22854.3 | |
| IL_4V8P_239 | 1/D1/1925:1930, 1/D1/2328:2331 | Intercalated tWH | geometric IL_5TBW_077 NA | |
| IL_4V8P_240 | 1/D1/1942:1947, 1/D1/1952:1958 | No text annotation | homologous IL_8C3A_084 NA | |
| IL_4V8P_241 | 1/D1/1964:1966, 1/D1/2102:2104 | Isolated non-canonical cWW pair | homologous IL_5TBW_079 NA | |
| IL_4V8P_242 | 1/D1/2124:2125, 1/D1/2318:2320 | Single bulged A | homologous IL_5TBW_082 NA | |
| IL_4V8P_243 | 1/D1/2152:2157, 1/D1/2168:2175 | Kink-turn related | homologous IL_5TBW_083 NA | |
| IL_4V8P_244 | 1/D1/2191:2194, 1/D1/2240:2241 | Major groove intercalation | homologous IL_5TBW_084 NA | |
| IL_4V8P_245 | 1/D1/2195:2196, 1/D1/2236:2239 | Major groove intercalation | geometric IL_7A0S_067 IL_66635.4 | |
| IL_4V8P_246 | 1/D1/2199:2201, 1/D1/2232:2233 | Single bulged U | geometric IL_2A64_002 IL_89505.2 | |
| IL_4V8P_247 | 1/D1/2201:2205, 1/D1/2230:2232 | Major groove platform with extra pair | homologous IL_5TBW_087 NA | |
| IL_4V8P_248 | 1/D1/2206:2212, 1/D1/2223:2229 | No text annotation | homologous IL_5TBW_088 NA | |
| IL_4V8P_249 | 1/D1/2271:2272, 1/D1/2302:2305 | No text annotation | homologous IL_8C3A_094 NA | |
| IL_4V8P_250 | 1/D1/2272:2283, 1/D1/2299:2302 | No text annotation | geometric IL_5TBW_090 NA | |
| IL_4V8P_251 | 1/D1/2386:2389, 1/D1/2974:2976 | Major groove platform with extra pair | homologous IL_5TBW_091 NA | |
| IL_4V8P_252 | 1/D1/2391:2393, 1/D1/2969:2972 | No text annotation | homologous IL_8C3A_097 NA | |
| IL_4V8P_253 | 1/D1/2404:2406, 1/D1/2799:2800 | Single bulged U | homologous IL_5TBW_093 NA | |
| IL_4V8P_254 | 1/D1/2407:2408, 1/D1/2795:2798 | Minor groove platform | ||
| IL_4V8P_255 | 1/D1/2418:2421, 1/D1/2592:2596 | No text annotation | geometric IL_3NPQ_006 IL_86374.1 | |
| IL_4V8P_257 | 1/D1/2515:2521, 1/D1/2573:2576 | No text annotation | homologous IL_8C3A_106 NA | |
| IL_4V8P_258 | 1/D1/2557:2558, 1/D1/2561:2563 | Single bulged U | geometric IL_2PN3_003 IL_89505.2 | |
| IL_4V8P_259 | 1/D1/2603:2604, 1/D1/2614:2616 | Single bulged A | homologous IL_8C3A_107 NA | |
| IL_4V8P_260 | 1/D1/2655:2657, 1/D1/2675:2679 | Isolated tHS basepair with bulges | ||
| IL_4V8P_261 | 1/D1/2707:2710, 1/D1/2724:2727 | Tandem non-canonical cWW pairs | ||
| IL_4V8P_262 | 1/D1/2758:2760, 1/D1/2775:2777 | Isolated non-canonical cWW pair | geometric IL_5AOX_001 IL_10289.2 | |
| IL_4V8P_263 | 1/D1/2760:2762, 1/D1/2774:2775 | Single bulged U | geometric IL_4V9F_107 IL_89505.2 | |
| IL_4V8P_264 | 1/D1/2811:2812, 1/D1/2853:2855 | Major groove platform | geometric IL_5TBW_102 NA | |
| IL_4V8P_265 | 1/D1/2812:2814, 1/D1/2851:2853 | Isolated non-canonical cWW pair | homologous IL_5TBW_103 NA | |
| IL_4V8P_266 | 1/D1/2814:2816, 1/D1/2850:2851 | Major groove platform | geometric IL_5TBW_104 NA | |
| IL_4V8P_267 | 1/D1/2816:2818, 1/D1/2846:2850 | Major groove minor groove platform with extra cWW | geometric IL_5TBW_105 NA | |
| IL_4V8P_268 | 1/D1/2823:2827, 1/D1/2837:2841 | Triple sheared | ||
| IL_4V8P_269 | 1/D1/2864:2865, 1/D1/2937:2939 | Major groove platform | homologous IL_5TBW_107 NA | |
| IL_4V8P_270 | 1/D1/2867:2869, 1/D1/2931:2935 | Isolated non-canonical cWW with bulges | homologous IL_5TBW_108 NA | |
| IL_4V8P_271 | 1/D1/2869:2870, 1/D1/2928:2931 | Multiple bulged bases | geometric IL_5TBW_109 NA | |
| IL_4V8P_272 | 1/D1/2879:2880, 1/D1/2897:2900 | Major groove platform with intercalation | homologous IL_5TBW_111 NA | |
| IL_4V8P_273 | 1/D1/2906:2908, 1/D1/2914:2916 | Isolated non-canonical cWW pair | homologous IL_5TBW_112 NA | |
| IL_4V8P_274 | 1/D1/2948:2949, 1/D1/2958:2960 | Single bulged A | homologous IL_8C3A_122 NA | |
| IL_4V8P_275 | 1/D1/2993:2996, 1/D1/3128:3133 | Double sheared | ||
| IL_4V8P_276 | 1/D1/3007:3014, 1/D1/3019:3025 | 8x7 Sarcin-Ricin; G-bulge | ||
| IL_4V8P_277 | 1/D1/3036:3040, 1/D1/3080:3083 | Major groove minor groove platform with tHH | homologous IL_8C3A_126 NA | |
| IL_4V8P_278 | 1/D1/3043:3048, 1/D1/3073:3077 | UAA/GAN variation | ||
| IL_4V8P_279 | 1/D1/3052:3053, 1/D1/3066:3069 | Multiple bulged bases | homologous IL_5TBW_119 NA | |
| IL_4V8P_280 | 1/D1/3092:3096, 1/D1/3116:3120 | UAA/GAN | ||
| IL_4V8P_281 | 1/D1/3144:3146, 1/D1/3247:3248 | Single bulged U | geometric IL_7A0S_075 IL_89505.2 | |
| IL_4V8P_282 | 1/D1/3158:3160, 1/D1/3179:3180 | Single bulged A | geometric IL_3MJA_001 IL_31462.3 | |
| IL_4V8P_608 | 1/D1/3184:3186, 1/D1/3224:3225 | No text annotation | ||
| IL_4V8P_283 | 1/D1/3189:3193, 1/D1/3217:3221 | Triple sheared | ||
| IL_4V8P_284 | 1/D1/3195:3199, 1/D1/3212:3215 | UAA/GAN | ||
| IL_4V8P_285 | 1/D1/3260:3263, 1/D1/3271:3274 | Tandem non-canonical cWW pairs | ||
| IL_4V8P_286 | 1/D1/3281:3282, 1/D1/3338:3340 | Minor groove platform | ||
| IL_4V8P_287 | 1/D1/3286:3288, 1/D1/3329:3334 | No text annotation | homologous IL_8C3A_138 NA | |
| IL_4V8P_288 | 1/D1/3290:3295, 1/D1/3323:3327 | No text annotation | homologous IL_5TBW_133 NA | |
| IL_4V8P_289 | 1/D1/3297:3299, 1/D1/3320:3321 | Single bulged U | geometric IL_3MEI_001 IL_89505.2 | |
| IL_4V8P_290 | 1/D1/3300:3303, 1/D1/3316:3319 | Double sheared | ||
| IL_4V8P_291 | 1/E2/16:22, 1/F1/401:407 | Triple sheared with non-canonical cWW | homologous IL_5TBW_015 NA | |
| IL_4V8P_292 | 1/E2/28:29, 1/F1/336:338 | Single bulged A | homologous IL_5TBW_013 NA | |
| IL_4V8P_293 | 1/E2/67:69, 1/E2/94:97 | Isolated non-canonical cWW pair | homologous IL_5TBW_145 NA | |
| IL_4V8P_294 | 1/E2/71:72, 1/E2/90:92 | Single bulged U | geometric IL_7KVT_002 IL_89505.2 | |
| IL_4V8P_295 | 1/E2/147:149, 1/F1/6:7 | Single bulged U | geometric IL_3MEI_001 IL_89505.2 | |
| IL_4V8P_296 | 1/E3/15:16, 1/E3/62:64 | Single bulged A | homologous IL_5TBW_372 NA | |
| IL_4V8P_297 | 1/E3/21:26, 1/E3/56:57 | No text annotation | ||
| IL_4V8P_594 | 1/E3/21:27, 1/E3/52:57 | No text annotation | homologous IL_8P9A_365 IL_45841.1 | |
| IL_4V8P_298 | 1/E3/26:27, 1/E3/52:56 | No text annotation | ||
| IL_4V8P_299 | 1/E3/28:29, 1/E3/48:51 | Major groove minor groove platform; mini C-loop | homologous IL_5J7L_357 IL_68140.2 | |
| IL_4V8P_300 | 1/E3/32:36, 1/E3/41:45 | Symmetric double minor groove platform | geometric IL_4V9F_104 IL_58103.10 | |
| IL_4V8P_301 | 1/E3/71:78, 1/E3/98:104 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_5TBW_377 NA | |
| IL_4V8P_302 | 1/E3/82:85, 1/E3/92:94 | Isolated non-canonical cWW pair | homologous IL_5TBW_378 NA | |
| IL_4V8P_303 | 1/F1/25:26, 1/F1/54:56 | Single stack bend | homologous IL_5TBW_004 NA | |
| IL_4V8P_304 | 1/F1/29:36, 1/F1/43:51 | 9x8 Sarcin-Ricin; G-bulge | geometric IL_4WF9_008 IL_84694.1 | |
| IL_4V8P_305 | 1/F1/80:87, 1/F1/95:101 | No text annotation | homologous IL_8C3A_006 NA | |
| IL_4V8P_306 | 1/F1/121:122, 1/F1/144:149 | No text annotation | homologous IL_8C3A_007 NA | |
| IL_4V8P_307 | 1/F1/125:128, 1/F1/138:141 | Double sheared | geometric IL_4LFB_060 IL_09705.13 | |
| IL_4V8P_308 | 1/F1/158:159, 1/F1/260:262 | Single bulged U | geometric IL_5J7L_334 IL_89505.2 | |
| IL_4V8P_309 | 1/F1/162:165, 1/F1/254:257 | Double sheared | geometric IL_3D0U_002 IL_09705.13 | |
| IL_4V8P_310 | 1/F1/167:171, 1/F1/248:252 | No text annotation | ||
| IL_4V8P_311 | 1/F1/173:175, 1/F1/245:246 | Single stack bend | geometric IL_5TBW_004 NA | |
| IL_4V8P_312 | 1/F1/177:178, 1/F1/240:243 | Multiple bulged bases | geometric IL_7V9E_001 IL_82107.2 | |
| IL_4V8P_313 | 1/F1/189:191, 1/F1/204:205 | Single bulged U | homologous IL_8C3A_013 NA | |
| IL_4V8P_314 | 1/F1/375:378, 1/F1/389:400 | No text annotation | homologous IL_5TBW_014 NA | |
| IL_4V8P_315 | 1/F1/422:424, 1/F1/656:658 | Isolated non-canonical cWW pair | geometric IL_4E48_001 IL_10289.2 | |
| IL_4V8P_596 | 1/F1/430:435, 1/F1/647:650 | No text annotation | ||
| IL_4V8P_317 | 1/F1/443:445, 1/F1/532:534 | Isolated non-canonical cWW pair | geometric IL_2R8S_001 IL_10289.2 | |
| IL_4V8P_318 | 1/F1/449:455, 1/F1/523:528 | No text annotation | ||
| IL_4V8P_319 | 1/F1/457:462, 1/F1/516:521 | No text annotation | ||
| IL_4V8P_320 | 1/F1/466:468, 1/F1/511:512 | Single stack bend | geometric IL_4V83_236 IL_06586.2 | |
| IL_4V8P_321 | 1/F1/469:470, 1/F1/507:510 | Major groove minor groove platform; mini C-loop | geometric IL_1I6U_002 IL_68140.2 | |
| IL_4V8P_597 | 1/F1/469:472, 1/F1/506:510 | No text annotation | ||
| IL_4V8P_322 | 1/F1/470:472, 1/F1/506:507 | Minor groove platform | geometric IL_4V88_412 NA | |
| IL_4V8P_323 | 1/F1/473:474, 1/F1/503:505 | Major groove platform | geometric IL_4WF9_078 IL_48076.4 | |
| IL_4V8P_324 | 1/F1/475:479, 1/F1/499:502 | UAA/GAN variation | geometric IL_2R8S_002 IL_77691.4 | |
| IL_4V8P_325 | 1/F1/484:486, 1/F1/493:494 | Single bulged A | geometric IL_6WPI_001 IL_31462.3 | |
| IL_4V8P_326 | 1/F1/555:557, 1/F1/610:612 | Isolated cWS basepair | geometric IL_4WF9_034 NA | |
| IL_4V8P_327 | 1/F1/562:569, 1/F1/600:605 | No text annotation | ||
| IL_4V8P_328 | 1/F1/571:574, 1/F1/594:598 | UAA/GAN related | geometric IL_3IGI_009 IL_77691.4 | |
| IL_4V8P_329 | 1/F1/577:580, 1/F1/589:591 | Isolated non-canonical cWW pair | geometric IL_4K31_003 IL_37047.1 | |
| IL_4V8P_330 | 1/F1/689:691, 1/F1/820:822 | Isolated non-canonical cWW pair | geometric IL_1UN6_005 IL_10289.2 | |
| IL_4V8P_331 | 1/F1/704:708, 1/F1/721:725 | No text annotation | ||
| IL_4V8P_332 | 1/F1/751:755, 1/F1/764:769 | Triple sheared related | geometric IL_5J7L_063 IL_80231.1 | |
| IL_4V8P_333 | 1/F1/776:777, 1/F1/804:806 | Single bulged A | homologous IL_5TBW_024 NA | |
| IL_4V8P_334 | 1/F1/779:780, 1/F1/800:802 | Minor groove platform | geometric IL_4R4V_001 IL_92540.1 | |
| IL_4V8P_335 | 1/F1/781:786, 1/F1/794:799 | No text annotation | ||
| IL_4V8P_336 | 1/F1/828:830, 1/F1/963:965 | Isolated non-canonical cWW pair | geometric IL_5TBW_027 NA | |
| IL_4V8P_337 | 1/F1/830:834, 1/F1/956:963 | tHW-tHW cross-strand stack | homologous IL_5TBW_028 NA | |
| IL_4V8P_338 | 1/F1/853:854, 1/F1/920:922 | Single bulged A | homologous IL_8C3A_031 NA | |
| IL_4V8P_339 | 1/F1/858:863, 1/F1/880:886 | Quadruple sheared | geometric IL_3FTF_001 IL_06136.2 | |
| IL_4V8P_340 | 1/F1/894:897, 1/F1/913:915 | Major groove platform with extra cWW | homologous IL_8C3A_034 NA | |
| IL_4V8P_341 | 1/F1/898:900, 1/F1/911:912 | Single bulged U | homologous IL_8C3A_035 NA | |
| IL_4V8P_342 | 1/F1/932:934, 1/F1/944:948 | No text annotation | homologous IL_8C3A_036 NA | |
| IL_4V8P_343 | 1/F1/979:981, 1/F1/990:992 | Isolated non-canonical cWW pair | homologous IL_5TBW_034 NA | |
| IL_4V8P_344 | 1/F1/994:995, 1/F1/1138:1140 | Single stack bend | homologous IL_5TBW_035 NA | |
| IL_4V8P_345 | 1/F1/1001:1007, 1/F1/1129:1132 | No text annotation | ||
| IL_4V8P_346 | 1/F1/1009:1011, 1/F1/1126:1127 | Single bulged G | homologous IL_8C3A_040 NA | |
| IL_4V8P_609 | 1/F1/1018:1023, 1/F1/1078:1083 | No text annotation | ||
| IL_4V8P_610 | 1/F1/1023:1024, 1/F1/1076:1078 | No text annotation | ||
| IL_4V8P_348 | 1/F1/1025:1030, 1/F1/1072:1075 | C-loop | homologous IL_5TBW_040 NA | |
| IL_4V8P_349 | 1/F1/1032:1035, 1/F1/1067:1070 | Tandem non-canonical cWW pairs | homologous IL_5TBW_041 NA | |
| IL_4V8P_598 | 1/F1/1032:1037, 1/F1/1065:1070 | No text annotation | ||
| IL_4V8P_350 | 1/F1/1035:1037, 1/F1/1065:1067 | Isolated non-canonical cWW pair | geometric IL_5TBW_042 NA | |
| IL_4V8P_351 | 1/F1/1039:1042, 1/F1/1062:1063 | Minor groove platform | geometric IL_5T83_003 IL_92540.1 | |
| IL_4V8P_352 | 1/F1/1094:1096, 1/F1/1117:1118 | Single bulged C | geometric IL_5J7L_276 IL_61258.14 | |
| IL_4V8P_353 | 1/F1/1101:1104, 1/F1/1111:1112 | Multiple bulged bases | geometric IL_5WLH_001 IL_82107.2 | |
| IL_4V8P_354 | 1/F1/1147:1149, 1/F1/1163:1165 | Isolated non-canonical cWW pair | homologous IL_5TBW_046 NA | |
| IL_4V8P_356 | 1/F1/1193:1198, 1/F1/1355:1360 | UAA/GAN with extra cWW | geometric IL_4WF9_104 IL_49767.8 | |
| IL_4V8P_357 | 1/F1/1200:1207, 1/F1/1352:1353 | SSU/LSU pseudoknot | geometric IL_7RQB_037 NA | |
| IL_4V8P_358 | 1/F1/1207:1209, 1/F1/1351:1352 | Single bulged U | homologous IL_8C3A_053 NA | |
| IL_4V8P_359 | 1/F1/1214:1221, 1/F1/1341:1346 | No text annotation | geometric IL_5TBW_051 NA | |
| IL_4V8P_360 | 1/F1/1221:1232, 1/F1/1326:1341 | No text annotation | geometric IL_5TBW_052 NA | |
| IL_4V8P_361 | 1/F1/1234:1236, 1/F1/1323:1324 | Single bulged U | homologous IL_8C3A_056 NA | |
| IL_4V8P_599 | 1/F1/1245:1253, 1/F1/1310:1314 | No text annotation | homologous IL_8P9A_282 IL_99692.1 | |
| IL_4V8P_363 | 1/F1/1403:1405, 1/F1/1454:1457 | Isolated cWS basepair | homologous IL_5TBW_057 NA | |
| IL_4V8P_364 | 1/F1/1414:1421, 1/F1/1441:1445 | Kink-turn | homologous IL_5TBW_059 NA | |
| IL_4V8P_365 | 1/F1/1424:1426, 1/F1/1437:1438 | Single bulged A | homologous IL_5TBW_060 NA | |
| IL_4V8P_366 | 1/F1/1470:1476, 1/F1/2349:2354 | 7x6 Sarcin-Ricin; G-bulge | homologous IL_5TBW_061 NA | |
| IL_4V8P_367 | 1/F1/1518:1521, 1/F1/1859:1860 | Major groove platform; stack outside cWW | geometric IL_4V9F_050 IL_50694.5 | |
| IL_4V8P_368 | 1/F1/1527:1531, 1/F1/1539:1541 | Minor groove platform | geometric IL_4LFB_037 IL_47078.2 | |
| IL_4V8P_369 | 1/F1/1558:1562, 1/F1/1610:1615 | UAA/GAN | homologous IL_5TBW_063 NA | |
| IL_4V8P_370 | 1/F1/1585:1589, 1/F1/1604:1606 | No text annotation | ||
| IL_4V8P_371 | 1/F1/1643:1645, 1/F1/1849:1850 | Single stack bend | geometric IL_4LFB_041 IL_06586.2 | |
| IL_4V8P_372 | 1/F1/1648:1651, 1/F1/1843:1846 | No text annotation | ||
| IL_4V8P_373 | 1/F1/1685:1687, 1/F1/1812:1814 | Isolated non-canonical cWW pair | homologous IL_8C3A_074 NA | |
| IL_4V8P_374 | 1/F1/1693:1694, 1/F1/1804:1806 | Single bulged C | geometric IL_5TBW_069 NA | |
| IL_4V8P_375 | 1/F1/1694:1695, 1/F1/1802:1804 | Single stack bend | homologous IL_8C3A_076 NA | |
| IL_4V8P_376 | 1/F1/1718:1722, 1/F1/1772:1777 | No text annotation | homologous IL_8C3A_077 NA | |
| IL_4V8P_377 | 1/F1/1726:1730, 1/F1/1763:1768 | No text annotation | ||
| IL_4V8P_378 | 1/F1/1733:1734, 1/F1/1758:1760 | No text annotation | ||
| IL_4V8P_379 | 1/F1/1735:1741, 1/F1/1751:1757 | Kink-turn | homologous IL_5TBW_073 NA | |
| IL_4V8P_380 | 1/F1/1907:1913, 1/F1/2341:2344 | No text annotation | homologous IL_8C3A_080 NA | |
| IL_4V8P_381 | 1/F1/1919:1921, 1/F1/2333:2335 | Isolated tWW turn | homologous IL_5TBW_075 NA | |
| IL_4V8P_382 | 1/F1/1922:1925, 1/F1/2331:2332 | Major groove platform; stack outside cWW | homologous IL_5TBW_076 NA | |
| IL_4V8P_600 | 1/F1/1922:1930, 1/F1/2328:2332 | No text annotation | homologous IL_8P9A_305 IL_22854.3 | |
| IL_4V8P_383 | 1/F1/1925:1930, 1/F1/2328:2331 | Intercalated tWH | geometric IL_5TBW_077 NA | |
| IL_4V8P_384 | 1/F1/1942:1947, 1/F1/1952:1958 | tSH-tSH-tHH-tHS | geometric IL_4V9F_063 IL_47346.1 | |
| IL_4V8P_385 | 1/F1/1964:1966, 1/F1/2102:2104 | Isolated non-canonical cWW pair | homologous IL_5TBW_079 NA | |
| IL_4V8P_386 | 1/F1/2124:2125, 1/F1/2318:2320 | Single bulged A | homologous IL_5TBW_082 NA | |
| IL_4V8P_387 | 1/F1/2152:2157, 1/F1/2168:2175 | Kink-turn related | homologous IL_5TBW_083 NA | |
| IL_4V8P_388 | 1/F1/2191:2194, 1/F1/2240:2241 | Major groove intercalation | homologous IL_5TBW_084 NA | |
| IL_4V8P_389 | 1/F1/2195:2196, 1/F1/2236:2239 | Major groove intercalation | geometric IL_7A0S_067 IL_66635.4 | |
| IL_4V8P_390 | 1/F1/2199:2201, 1/F1/2232:2233 | Single bulged U | geometric IL_2A64_002 IL_89505.2 | |
| IL_4V8P_391 | 1/F1/2201:2205, 1/F1/2230:2232 | Major groove platform with extra pair | homologous IL_5TBW_087 NA | |
| IL_4V8P_392 | 1/F1/2206:2212, 1/F1/2223:2229 | No text annotation | homologous IL_5TBW_088 NA | |
| IL_4V8P_393 | 1/F1/2271:2272, 1/F1/2302:2305 | Bulged stacked bases | geometric IL_5TBW_089 NA | |
| IL_4V8P_394 | 1/F1/2272:2283, 1/F1/2299:2302 | No text annotation | homologous IL_8C3A_095 NA | |
| IL_4V8P_395 | 1/F1/2386:2389, 1/F1/2974:2976 | Major groove platform with extra pair | homologous IL_5TBW_091 NA | |
| IL_4V8P_396 | 1/F1/2391:2393, 1/F1/2969:2972 | No text annotation | homologous IL_8C3A_097 NA | |
| IL_4V8P_397 | 1/F1/2404:2406, 1/F1/2799:2800 | Single bulged U | homologous IL_5TBW_093 NA | |
| IL_4V8P_398 | 1/F1/2407:2408, 1/F1/2795:2798 | Minor groove platform | homologous IL_5TBW_094 NA | |
| IL_4V8P_399 | 1/F1/2418:2421, 1/F1/2592:2596 | No text annotation | geometric IL_3NPQ_006 IL_86374.1 | |
| IL_4V8P_401 | 1/F1/2515:2521, 1/F1/2573:2576 | No text annotation | homologous IL_8C3A_106 NA | |
| IL_4V8P_402 | 1/F1/2557:2558, 1/F1/2561:2563 | Single bulged U | geometric IL_2PN3_003 IL_89505.2 | |
| IL_4V8P_403 | 1/F1/2603:2604, 1/F1/2614:2616 | Single bulged A | homologous IL_8C3A_107 NA | |
| IL_4V8P_404 | 1/F1/2655:2657, 1/F1/2675:2679 | No text annotation | homologous IL_8C3A_108 NA | |
| IL_4V8P_405 | 1/F1/2707:2710, 1/F1/2724:2727 | Tandem non-canonical cWW pairs | homologous IL_8C3A_109 NA | |
| IL_4V8P_406 | 1/F1/2758:2760, 1/F1/2775:2777 | Isolated non-canonical cWW pair | geometric IL_5AOX_001 IL_10289.2 | |
| IL_4V8P_407 | 1/F1/2760:2762, 1/F1/2774:2775 | Single bulged U | geometric IL_4V9F_107 IL_89505.2 | |
| IL_4V8P_408 | 1/F1/2811:2812, 1/F1/2853:2855 | Major groove platform | geometric IL_5TBW_102 NA | |
| IL_4V8P_409 | 1/F1/2812:2814, 1/F1/2851:2853 | Isolated non-canonical cWW pair | homologous IL_5TBW_103 NA | |
| IL_4V8P_410 | 1/F1/2814:2816, 1/F1/2850:2851 | Major groove platform | geometric IL_5TBW_104 NA | |
| IL_4V8P_411 | 1/F1/2816:2818, 1/F1/2846:2850 | Major groove minor groove platform with extra cWW | geometric IL_5TBW_105 NA | |
| IL_4V8P_412 | 1/F1/2823:2827, 1/F1/2837:2841 | No text annotation | homologous IL_8C3A_114 NA | |
| IL_4V8P_413 | 1/F1/2864:2865, 1/F1/2937:2939 | Major groove platform | homologous IL_5TBW_107 NA | |
| IL_4V8P_414 | 1/F1/2867:2869, 1/F1/2931:2935 | Isolated non-canonical cWW with bulges | homologous IL_5TBW_108 NA | |
| IL_4V8P_415 | 1/F1/2869:2870, 1/F1/2928:2931 | Multiple bulged bases | geometric IL_5TBW_109 NA | |
| IL_4V8P_416 | 1/F1/2879:2880, 1/F1/2897:2900 | Major groove platform with intercalation | homologous IL_5TBW_111 NA | |
| IL_4V8P_417 | 1/F1/2906:2908, 1/F1/2914:2916 | Isolated non-canonical cWW pair | homologous IL_5TBW_112 NA | |
| IL_4V8P_418 | 1/F1/2948:2949, 1/F1/2958:2960 | Single bulged A | homologous IL_8C3A_122 NA | |
| IL_4V8P_419 | 1/F1/2993:2996, 1/F1/3128:3133 | Double sheared | homologous IL_8C3A_123 NA | |
| IL_4V8P_420 | 1/F1/3007:3014, 1/F1/3019:3025 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_5TBW_116 NA | |
| IL_4V8P_421 | 1/F1/3036:3040, 1/F1/3080:3083 | Major groove minor groove platform with tHH | homologous IL_8C3A_126 NA | |
| IL_4V8P_422 | 1/F1/3043:3048, 1/F1/3073:3077 | UAA/GAN related | homologous IL_5TBW_118 NA | |
| IL_4V8P_423 | 1/F1/3052:3053, 1/F1/3066:3069 | Multiple bulged bases | homologous IL_5TBW_119 NA | |
| IL_4V8P_424 | 1/F1/3092:3096, 1/F1/3116:3120 | UAA/GAN | homologous IL_5TBW_120 NA | |
| IL_4V8P_425 | 1/F1/3144:3146, 1/F1/3247:3248 | Single bulged U | geometric IL_7A0S_075 IL_89505.2 | |
| IL_4V8P_426 | 1/F1/3158:3160, 1/F1/3179:3180 | Single bulged A | geometric IL_3MJA_001 IL_31462.3 | |
| IL_4V8P_611 | 1/F1/3184:3186, 1/F1/3224:3225 | No text annotation | ||
| IL_4V8P_427 | 1/F1/3189:3193, 1/F1/3217:3221 | Triple sheared | geometric IL_3IGI_002 IL_50730.1 | |
| IL_4V8P_428 | 1/F1/3195:3199, 1/F1/3212:3215 | UAA/GAN variation | geometric IL_4LFB_062 IL_77691.4 | |
| IL_4V8P_429 | 1/F1/3260:3263, 1/F1/3271:3274 | Tandem non-canonical cWW pairs | homologous IL_8C3A_135 NA | |
| IL_4V8P_430 | 1/F1/3281:3282, 1/F1/3338:3340 | Minor groove platform related | geometric IL_7TZS_003 IL_92540.1 | |
| IL_4V8P_431 | 1/F1/3286:3288, 1/F1/3329:3334 | No text annotation | homologous IL_8C3A_138 NA | |
| IL_4V8P_432 | 1/F1/3290:3295, 1/F1/3323:3327 | No text annotation | homologous IL_5TBW_133 NA | |
| IL_4V8P_433 | 1/F1/3297:3299, 1/F1/3320:3321 | Single bulged U | geometric IL_3MEI_001 IL_89505.2 | |
| IL_4V8P_434 | 1/F1/3300:3303, 1/F1/3316:3319 | Double sheared; A in syn | homologous IL_8C3A_141 NA | |
| IL_4V8P_435 | 1/G2/16:22, 1/H1/401:407 | Triple sheared with non-canonical cWW | homologous IL_5TBW_015 NA | |
| IL_4V8P_436 | 1/G2/28:29, 1/H1/336:338 | Single bulged A | homologous IL_5TBW_013 NA | |
| IL_4V8P_437 | 1/G2/67:69, 1/G2/94:97 | Isolated non-canonical cWW pair | homologous IL_5TBW_145 NA | |
| IL_4V8P_438 | 1/G2/71:72, 1/G2/90:92 | Single bulged U | geometric IL_7KVT_002 IL_89505.2 | |
| IL_4V8P_439 | 1/G2/147:149, 1/H1/6:7 | Single bulged U | geometric IL_3MEI_001 IL_89505.2 | |
| IL_4V8P_440 | 1/G3/15:16, 1/G3/62:64 | Single bulged A | homologous IL_5TBW_372 NA | |
| IL_4V8P_441 | 1/G3/21:26, 1/G3/56:57 | No text annotation | ||
| IL_4V8P_601 | 1/G3/21:27, 1/G3/52:57 | No text annotation | homologous IL_8P9A_365 IL_45841.1 | |
| IL_4V8P_442 | 1/G3/26:27, 1/G3/52:56 | No text annotation | ||
| IL_4V8P_443 | 1/G3/28:29, 1/G3/48:51 | Major groove minor groove platform; mini C-loop | homologous IL_5J7L_357 IL_68140.2 | |
| IL_4V8P_444 | 1/G3/32:36, 1/G3/41:45 | Symmetric double minor groove platform | geometric IL_4V9F_104 IL_58103.10 | |
| IL_4V8P_445 | 1/G3/71:78, 1/G3/98:104 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_5TBW_377 NA | |
| IL_4V8P_446 | 1/G3/82:85, 1/G3/92:94 | Isolated non-canonical cWW pair | homologous IL_5TBW_378 NA | |
| IL_4V8P_447 | 1/H1/25:26, 1/H1/54:56 | Single stack bend | homologous IL_5TBW_004 NA | |
| IL_4V8P_448 | 1/H1/29:36, 1/H1/43:51 | 9x8 Sarcin-Ricin; G-bulge | geometric IL_4WF9_008 IL_84694.1 | |
| IL_4V8P_449 | 1/H1/80:87, 1/H1/95:101 | No text annotation | homologous IL_8C3A_006 NA | |
| IL_4V8P_450 | 1/H1/121:122, 1/H1/144:149 | No text annotation | geometric IL_5TBW_007 NA | |
| IL_4V8P_451 | 1/H1/125:128, 1/H1/138:141 | Double sheared | geometric IL_4LFB_060 IL_09705.13 | |
| IL_4V8P_452 | 1/H1/158:159, 1/H1/260:262 | Single bulged U | geometric IL_5J7L_334 IL_89505.2 | |
| IL_4V8P_453 | 1/H1/162:165, 1/H1/254:257 | Double sheared | geometric IL_3D0U_002 IL_09705.13 | |
| IL_4V8P_454 | 1/H1/167:171, 1/H1/248:252 | No text annotation | ||
| IL_4V8P_455 | 1/H1/173:175, 1/H1/245:246 | Single stack bend | geometric IL_5TBW_004 NA | |
| IL_4V8P_456 | 1/H1/177:178, 1/H1/240:243 | Multiple bulged bases | geometric IL_7V9E_001 IL_82107.2 | |
| IL_4V8P_457 | 1/H1/189:191, 1/H1/204:205 | Single bulged U | homologous IL_8C3A_013 NA | |
| IL_4V8P_458 | 1/H1/375:378, 1/H1/389:400 | No text annotation | homologous IL_5TBW_014 NA | |
| IL_4V8P_459 | 1/H1/422:424, 1/H1/656:658 | Isolated non-canonical cWW pair | geometric IL_4E48_001 IL_10289.2 | |
| IL_4V8P_603 | 1/H1/430:435, 1/H1/647:650 | No text annotation | ||
| IL_4V8P_461 | 1/H1/443:445, 1/H1/532:534 | Isolated non-canonical cWW pair | geometric IL_2R8S_001 IL_10289.2 | |
| IL_4V8P_462 | 1/H1/449:455, 1/H1/523:528 | No text annotation | ||
| IL_4V8P_463 | 1/H1/457:462, 1/H1/516:521 | No text annotation | ||
| IL_4V8P_464 | 1/H1/466:468, 1/H1/511:512 | Single stack bend | geometric IL_4V83_236 IL_06586.2 | |
| IL_4V8P_465 | 1/H1/469:470, 1/H1/507:510 | Major groove minor groove platform; mini C-loop | geometric IL_1I6U_002 IL_68140.2 | |
| IL_4V8P_604 | 1/H1/469:472, 1/H1/506:510 | No text annotation | ||
| IL_4V8P_468 | 1/H1/475:479, 1/H1/499:502 | UAA/GAN variation | geometric IL_2R8S_002 IL_77691.4 | |
| IL_4V8P_470 | 1/H1/555:557, 1/H1/610:612 | Isolated cWS basepair | geometric IL_4WF9_034 NA | |
| IL_4V8P_471 | 1/H1/562:569, 1/H1/600:605 | No text annotation | ||
| IL_4V8P_472 | 1/H1/571:574, 1/H1/594:598 | UAA/GAN related | geometric IL_3IGI_009 IL_77691.4 | |
| IL_4V8P_473 | 1/H1/577:580, 1/H1/589:591 | Isolated non-canonical cWW pair | geometric IL_4K31_003 IL_37047.1 | |
| IL_4V8P_474 | 1/H1/689:691, 1/H1/820:822 | Isolated non-canonical cWW pair | geometric IL_1UN6_005 IL_10289.2 | |
| IL_4V8P_475 | 1/H1/704:708, 1/H1/721:725 | No text annotation | ||
| IL_4V8P_476 | 1/H1/751:755, 1/H1/764:769 | Triple sheared related | geometric IL_5J7L_063 IL_80231.1 | |
| IL_4V8P_477 | 1/H1/776:777, 1/H1/804:806 | Single bulged A | homologous IL_5TBW_024 NA | |
| IL_4V8P_478 | 1/H1/779:780, 1/H1/800:802 | Minor groove platform | geometric IL_4R4V_001 IL_92540.1 | |
| IL_4V8P_479 | 1/H1/781:786, 1/H1/794:799 | No text annotation | ||
| IL_4V8P_480 | 1/H1/828:830, 1/H1/963:965 | Isolated non-canonical cWW pair | homologous IL_8C3A_029 NA | |
| IL_4V8P_481 | 1/H1/830:834, 1/H1/956:963 | tHW-tHW cross-strand stack | homologous IL_5TBW_028 NA | |
| IL_4V8P_482 | 1/H1/853:854, 1/H1/920:922 | Single bulged A | homologous IL_8C3A_031 NA | |
| IL_4V8P_483 | 1/H1/858:863, 1/H1/880:886 | Quadruple sheared | geometric IL_3FTF_001 IL_06136.2 | |
| IL_4V8P_484 | 1/H1/894:897, 1/H1/913:915 | Major groove platform with extra cWW | homologous IL_8C3A_034 NA | |
| IL_4V8P_485 | 1/H1/898:900, 1/H1/911:912 | Single bulged U | homologous IL_8C3A_035 NA | |
| IL_4V8P_486 | 1/H1/932:934, 1/H1/944:948 | Multiple bulged bases | geometric IL_5TBW_033 NA | |
| IL_4V8P_487 | 1/H1/979:981, 1/H1/990:992 | Isolated non-canonical cWW pair | homologous IL_5TBW_034 NA | |
| IL_4V8P_488 | 1/H1/994:995, 1/H1/1138:1140 | Single stack bend | homologous IL_5TBW_035 NA | |
| IL_4V8P_489 | 1/H1/1001:1007, 1/H1/1129:1132 | No text annotation | ||
| IL_4V8P_490 | 1/H1/1009:1011, 1/H1/1126:1127 | Single bulged G | homologous IL_8C3A_040 NA | |
| IL_4V8P_491 | 1/H1/1018:1023, 1/H1/1078:1083 | 5x5 Sarcin-Ricin with intercalated A; G-bulge | geometric IL_7A0S_027 NA | |
| IL_4V8P_492 | 1/H1/1023:1024, 1/H1/1076:1078 | Minor groove platform | homologous IL_5TBW_039 NA | |
| IL_4V8P_493 | 1/H1/1025:1030, 1/H1/1072:1075 | C-loop | homologous IL_5TBW_040 NA | |
| IL_4V8P_494 | 1/H1/1032:1035, 1/H1/1067:1070 | Tandem non-canonical cWW pairs | homologous IL_5TBW_041 NA | |
| IL_4V8P_495 | 1/H1/1035:1037, 1/H1/1065:1067 | Isolated non-canonical cWW pair | geometric IL_5TBW_042 NA | |
| IL_4V8P_496 | 1/H1/1039:1042, 1/H1/1062:1063 | Minor groove platform | geometric IL_4R4V_001 IL_92540.1 | |
| IL_4V8P_498 | 1/H1/1094:1096, 1/H1/1117:1118 | Single bulged C | geometric IL_5J7L_276 IL_61258.14 | |
| IL_4V8P_499 | 1/H1/1101:1104, 1/H1/1111:1112 | Single bulged G | homologous IL_8C3A_048 NA | |
| IL_4V8P_500 | 1/H1/1147:1149, 1/H1/1163:1165 | Isolated non-canonical cWW pair | homologous IL_5TBW_046 NA | |
| IL_4V8P_502 | 1/H1/1193:1198, 1/H1/1355:1360 | UAA/GAN with extra cWW | geometric IL_4WF9_104 IL_49767.8 | |
| IL_4V8P_503 | 1/H1/1200:1207, 1/H1/1352:1353 | SSU/LSU pseudoknot | geometric IL_7RQB_037 NA | |
| IL_4V8P_504 | 1/H1/1207:1209, 1/H1/1351:1352 | Single bulged U | homologous IL_8C3A_053 NA | |
| IL_4V8P_505 | 1/H1/1214:1221, 1/H1/1341:1346 | No text annotation | homologous IL_8C3A_054 NA | |
| IL_4V8P_506 | 1/H1/1221:1232, 1/H1/1326:1341 | No text annotation | geometric IL_5TBW_052 NA | |
| IL_4V8P_507 | 1/H1/1234:1236, 1/H1/1323:1324 | Single bulged U | homologous IL_8C3A_056 NA | |
| IL_4V8P_605 | 1/H1/1245:1253, 1/H1/1310:1314 | No text annotation | homologous IL_8P9A_282 IL_99692.1 | |
| IL_4V8P_509 | 1/H1/1403:1405, 1/H1/1454:1457 | Isolated cWS basepair | homologous IL_5TBW_057 NA | |
| IL_4V8P_510 | 1/H1/1414:1421, 1/H1/1441:1445 | Kink-turn | homologous IL_5TBW_059 NA | |
| IL_4V8P_511 | 1/H1/1424:1426, 1/H1/1437:1438 | Single bulged A | homologous IL_5TBW_060 NA | |
| IL_4V8P_512 | 1/H1/1470:1476, 1/H1/2349:2354 | 7x6 Sarcin-Ricin; G-bulge | homologous IL_5TBW_061 NA | |
| IL_4V8P_513 | 1/H1/1518:1521, 1/H1/1859:1860 | Major groove platform; stack outside cWW | geometric IL_4V9F_050 IL_50694.5 | |
| IL_4V8P_514 | 1/H1/1527:1531, 1/H1/1539:1541 | Minor groove platform | geometric IL_4LFB_037 IL_47078.2 | |
| IL_4V8P_515 | 1/H1/1558:1562, 1/H1/1610:1615 | UAA/GAN | homologous IL_5TBW_063 NA | |
| IL_4V8P_516 | 1/H1/1585:1589, 1/H1/1604:1606 | No text annotation | ||
| IL_4V8P_517 | 1/H1/1643:1645, 1/H1/1849:1850 | Single stack bend | geometric IL_4LFB_041 IL_06586.2 | |
| IL_4V8P_518 | 1/H1/1648:1651, 1/H1/1843:1846 | No text annotation | ||
| IL_4V8P_519 | 1/H1/1685:1687, 1/H1/1812:1814 | Isolated non-canonical cWW pair | homologous IL_8C3A_074 NA | |
| IL_4V8P_520 | 1/H1/1693:1694, 1/H1/1804:1806 | Single bulged C | homologous IL_8C3A_075 NA | |
| IL_4V8P_521 | 1/H1/1694:1695, 1/H1/1802:1804 | Single stack bend | geometric IL_4WF9_007 IL_06586.2 | |
| IL_4V8P_522 | 1/H1/1718:1722, 1/H1/1772:1777 | No text annotation | homologous IL_8C3A_077 NA | |
| IL_4V8P_523 | 1/H1/1726:1730, 1/H1/1763:1768 | No text annotation | ||
| IL_4V8P_524 | 1/H1/1733:1734, 1/H1/1758:1760 | No text annotation | ||
| IL_4V8P_525 | 1/H1/1735:1741, 1/H1/1751:1757 | Kink-turn | homologous IL_5TBW_073 NA | |
| IL_4V8P_526 | 1/H1/1907:1913, 1/H1/2341:2344 | No text annotation | homologous IL_8C3A_080 NA | |
| IL_4V8P_527 | 1/H1/1919:1921, 1/H1/2333:2335 | Isolated tWW turn | homologous IL_5TBW_075 NA | |
| IL_4V8P_528 | 1/H1/1922:1925, 1/H1/2331:2332 | Major groove platform; stack outside cWW | homologous IL_5TBW_076 NA | |
| IL_4V8P_606 | 1/H1/1922:1930, 1/H1/2328:2332 | No text annotation | homologous IL_8P9A_305 IL_22854.3 | |
| IL_4V8P_529 | 1/H1/1925:1930, 1/H1/2328:2331 | Intercalated tWH | geometric IL_5TBW_077 NA | |
| IL_4V8P_530 | 1/H1/1942:1947, 1/H1/1952:1958 | No text annotation | homologous IL_8C3A_084 NA | |
| IL_4V8P_531 | 1/H1/1964:1966, 1/H1/2102:2104 | Isolated non-canonical cWW pair | homologous IL_5TBW_079 NA | |
| IL_4V8P_532 | 1/H1/2124:2125, 1/H1/2318:2320 | Single bulged A | homologous IL_5TBW_082 NA | |
| IL_4V8P_533 | 1/H1/2152:2157, 1/H1/2168:2175 | Kink-turn related | homologous IL_5TBW_083 NA | |
| IL_4V8P_534 | 1/H1/2191:2194, 1/H1/2240:2241 | Major groove intercalation | homologous IL_5TBW_084 NA | |
| IL_4V8P_535 | 1/H1/2195:2196, 1/H1/2236:2239 | Major groove intercalation | geometric IL_7A0S_067 IL_66635.4 | |
| IL_4V8P_536 | 1/H1/2199:2201, 1/H1/2232:2233 | Single bulged U | geometric IL_2A64_002 IL_89505.2 | |
| IL_4V8P_537 | 1/H1/2201:2205, 1/H1/2230:2232 | Major groove platform with extra pair | homologous IL_5TBW_087 NA | |
| IL_4V8P_538 | 1/H1/2206:2212, 1/H1/2223:2229 | No text annotation | homologous IL_5TBW_088 NA | |
| IL_4V8P_539 | 1/H1/2271:2272, 1/H1/2302:2305 | Bulged stacked bases | geometric IL_5TBW_089 NA | |
| IL_4V8P_540 | 1/H1/2272:2283, 1/H1/2299:2302 | No text annotation | homologous IL_8C3A_095 NA | |
| IL_4V8P_541 | 1/H1/2386:2389, 1/H1/2974:2976 | Major groove platform with extra pair | homologous IL_5TBW_091 NA | |
| IL_4V8P_542 | 1/H1/2391:2393, 1/H1/2969:2972 | No text annotation | homologous IL_8C3A_097 NA | |
| IL_4V8P_543 | 1/H1/2404:2406, 1/H1/2799:2800 | Single bulged U | homologous IL_5TBW_093 NA | |
| IL_4V8P_544 | 1/H1/2407:2408, 1/H1/2795:2798 | Minor groove platform | homologous IL_5TBW_094 NA | |
| IL_4V8P_545 | 1/H1/2418:2421, 1/H1/2592:2596 | No text annotation | geometric IL_3NPQ_006 IL_86374.1 | |
| IL_4V8P_547 | 1/H1/2515:2521, 1/H1/2573:2576 | No text annotation | homologous IL_8C3A_106 NA | |
| IL_4V8P_548 | 1/H1/2557:2558, 1/H1/2561:2563 | Single bulged U | geometric IL_2PN3_003 IL_89505.2 | |
| IL_4V8P_549 | 1/H1/2603:2604, 1/H1/2614:2616 | Single bulged A | homologous IL_8C3A_107 NA | |
| IL_4V8P_550 | 1/H1/2655:2657, 1/H1/2675:2679 | No text annotation | homologous IL_8C3A_108 NA | |
| IL_4V8P_551 | 1/H1/2707:2710, 1/H1/2724:2727 | Tandem non-canonical cWW pairs | homologous IL_8C3A_109 NA | |
| IL_4V8P_552 | 1/H1/2758:2760, 1/H1/2775:2777 | Isolated non-canonical cWW pair | geometric IL_5AOX_001 IL_10289.2 | |
| IL_4V8P_553 | 1/H1/2760:2762, 1/H1/2774:2775 | Single bulged U | geometric IL_4V9F_107 IL_89505.2 | |
| IL_4V8P_554 | 1/H1/2811:2812, 1/H1/2853:2855 | Major groove platform | geometric IL_5TBW_102 NA | |
| IL_4V8P_555 | 1/H1/2812:2814, 1/H1/2851:2853 | Isolated non-canonical cWW pair | geometric IL_5TBW_103 NA | |
| IL_4V8P_556 | 1/H1/2814:2816, 1/H1/2850:2851 | Major groove platform | homologous IL_8C3A_112 NA | |
| IL_4V8P_557 | 1/H1/2816:2818, 1/H1/2846:2850 | Major groove minor groove platform with extra cWW | homologous IL_8C3A_113 NA | |
| IL_4V8P_558 | 1/H1/2823:2827, 1/H1/2837:2841 | No text annotation | homologous IL_8C3A_114 NA | |
| IL_4V8P_559 | 1/H1/2864:2865, 1/H1/2937:2939 | Major groove platform | homologous IL_5TBW_107 NA | |
| IL_4V8P_560 | 1/H1/2867:2869, 1/H1/2931:2935 | Isolated non-canonical cWW with bulges | homologous IL_5TBW_108 NA | |
| IL_4V8P_561 | 1/H1/2869:2870, 1/H1/2928:2931 | Multiple bulged bases | geometric IL_5TBW_109 NA | |
| IL_4V8P_562 | 1/H1/2879:2880, 1/H1/2897:2900 | Major groove platform with intercalation | homologous IL_5TBW_111 NA | |
| IL_4V8P_563 | 1/H1/2906:2908, 1/H1/2914:2916 | Isolated non-canonical cWW pair | homologous IL_5TBW_112 NA | |
| IL_4V8P_564 | 1/H1/2948:2949, 1/H1/2958:2960 | Single bulged A | homologous IL_8C3A_122 NA | |
| IL_4V8P_565 | 1/H1/2993:2996, 1/H1/3128:3133 | Double sheared | homologous IL_8C3A_123 NA | |
| IL_4V8P_566 | 1/H1/3007:3014, 1/H1/3019:3025 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_5TBW_116 NA | |
| IL_4V8P_567 | 1/H1/3036:3040, 1/H1/3080:3083 | Major groove minor groove platform with tHH | homologous IL_8C3A_126 NA | |
| IL_4V8P_568 | 1/H1/3043:3048, 1/H1/3073:3077 | UAA/GAN related | homologous IL_8C3A_127 NA | |
| IL_4V8P_569 | 1/H1/3052:3053, 1/H1/3066:3069 | Multiple bulged bases | homologous IL_5TBW_119 NA | |
| IL_4V8P_570 | 1/H1/3092:3096, 1/H1/3116:3120 | UAA/GAN | homologous IL_5TBW_120 NA | |
| IL_4V8P_571 | 1/H1/3144:3146, 1/H1/3247:3248 | Single bulged U | geometric IL_7A0S_075 IL_89505.2 | |
| IL_4V8P_572 | 1/H1/3158:3160, 1/H1/3179:3180 | Single bulged A | geometric IL_3MJA_001 IL_31462.3 | |
| IL_4V8P_612 | 1/H1/3184:3186, 1/H1/3224:3225 | No text annotation | ||
| IL_4V8P_573 | 1/H1/3189:3193, 1/H1/3217:3221 | Triple sheared | geometric IL_3IGI_002 IL_50730.1 | |
| IL_4V8P_574 | 1/H1/3195:3199, 1/H1/3212:3215 | UAA/GAN variation | geometric IL_4LFB_062 IL_77691.4 | |
| IL_4V8P_575 | 1/H1/3260:3263, 1/H1/3271:3274 | Tandem non-canonical cWW pairs | homologous IL_8C3A_135 NA | |
| IL_4V8P_576 | 1/H1/3281:3282, 1/H1/3338:3340 | Minor groove platform related | geometric IL_7TZS_003 IL_92540.1 | |
| IL_4V8P_577 | 1/H1/3286:3288, 1/H1/3329:3334 | No text annotation | homologous IL_8C3A_138 NA | |
| IL_4V8P_578 | 1/H1/3290:3295, 1/H1/3323:3327 | No text annotation | homologous IL_5TBW_133 NA | |
| IL_4V8P_579 | 1/H1/3297:3299, 1/H1/3320:3321 | Single bulged U | geometric IL_3MEI_001 IL_89505.2 | |
| IL_4V8P_580 | 1/H1/3300:3303, 1/H1/3316:3319 | Double sheared; A in syn | homologous IL_8C3A_141 NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_4V8P_581 | No text annotation | ||
| IL_4V8P_017 | No text annotation | ||
| IL_4V8P_057 | No text annotation | ||
| IL_4V8P_064 | No text annotation | ||
| IL_4V8P_102 | No text annotation | ||
| IL_4V8P_148 | No text annotation | ||
| IL_4V8P_589 | No text annotation | ||
| IL_4V8P_171 | No text annotation | ||
| IL_4V8P_211 | No text annotation | ||
| IL_4V8P_218 | Kink-turn | ||
| IL_4V8P_256 | No text annotation | ||
| IL_4V8P_595 | No text annotation | ||
| IL_4V8P_316 | No text annotation | ||
| IL_4V8P_347 | No text annotation | ||
| IL_4V8P_355 | No text annotation | ||
| IL_4V8P_362 | No text annotation | ||
| IL_4V8P_400 | No text annotation | ||
| IL_4V8P_602 | No text annotation | ||
| IL_4V8P_460 | No text annotation | ||
| IL_4V8P_466 | Minor groove platform | ||
| IL_4V8P_467 | Major groove platform | ||
| IL_4V8P_469 | Single bulged A | ||
| IL_4V8P_497 | No text annotation | ||
| IL_4V8P_501 | No text annotation | ||
| IL_4V8P_508 | No text annotation | ||
| IL_4V8P_546 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_4V8P_001 | 1/A1/111:121, 1/A1/149:158, 1/A1/262:266 | No text annotation | homologous J3_8C3A_001 NA | |
| J3_4V8P_057 | 1/A1/111:122, 1/A1/144:158, 1/A1/262:266 | No text annotation | ||
| J3_4V8P_058 | 1/A1/184:189, 1/A1/205:214, 1/A1/226:234 | No text annotation | ||
| J3_4V8P_059 | 1/A1/339:355, 1/A1/362:367, 1/B2/24:27 | No text annotation | homologous J3_8P9A_045 NA | |
| J3_4V8P_060 | 1/A1/368:375, 1/A1/400:401, 1/B2/22:23 | No text annotation | geometric J3_5TBW_002 NA | |
| J3_4V8P_061 | 1/A1/368:378, 1/A1/389:401, 1/B2/22:23 | No text annotation | homologous J3_8C3A_049 NA | |
| J3_4V8P_002 | 1/A1/436:440, 1/A1/537:540, 1/A1/642:646 | No text annotation | ||
| J3_4V8P_003 | 1/A1/547:549, 1/A1/618:624, 1/A1/633:635 | No text annotation | ||
| J3_4V8P_004 | 1/A1/839:845, 1/A1/930:932, 1/A1/948:951 | No text annotation | homologous J3_5TBW_004 NA | |
| J3_4V8P_005 | 1/A1/854:856, 1/A1/888:892, 1/A1/917:920 | No text annotation | homologous J3_8C3A_004 NA | |
| J3_4V8P_062 | 1/A1/1012:1013, 1/A1/1088:1092, 1/A1/1120:1125 | No text annotation | ||
| J3_4V8P_006 | 1/A1/1505:1511, 1/A1/1881:1883, 1/A1/1895:1898 | No text annotation | homologous J3_5TBW_008 NA | |
| J3_4V8P_007 | 1/A1/1514:1517, 1/A1/1861:1867, 1/A1/1876:1878 | No text annotation | homologous J3_8C3A_007 NA | |
| J3_4V8P_063 | 1/A1/1552:1557, 1/A1/1616:1620, 1/A1/1637:1638 | No text annotation | homologous J3_8P9A_055 NA | |
| J3_4V8P_008 | 1/A1/1564:1567, 1/A1/1578:1585, 1/A1/1606:1608 | No text annotation | ||
| J3_4V8P_009 | 1/A1/1652:1656, 1/A1/1665:1673, 1/A1/1832:1842 | No text annotation | ||
| J3_4V8P_064 | 1/A1/1678:1682, 1/A1/1817:1818, 1/A1/1822:1827 | No text annotation | homologous J3_8C3A_055 NA | |
| J3_4V8P_010 | 1/A1/2427:2430, 1/A1/2507:2511, 1/A1/2580:2586 | No text annotation | geometric J3_4V9F_007 NA | |
| J3_4V8P_011 | 1/A1/2524:2527, 1/A1/2540:2553, 1/A1/2567:2570 | No text annotation | ||
| J3_4V8P_065 | 1/A1/2640:2642, 1/A1/2743:2754, 1/A1/2781:2786 | No text annotation | homologous J3_8C3A_056 NA | |
| J3_4V8P_012 | 1/A1/2653:2655, 1/A1/2679:2681, 1/A1/2690:2695 | No text annotation | homologous J3_8C3A_010 NA | |
| J3_4V8P_013 | 1/A1/2874:2877, 1/A1/2902:2904, 1/A1/2918:2924 | No text annotation | homologous J3_8P9A_063 NA | |
| J3_4V8P_109 | 1/A1/3153:3158, 1/A1/3180:3184, 1/A1/3225:3240 | No text annotation | ||
| J3_4V8P_067 | 1/A1/3259:3260, 1/A1/3274:3279, 1/A1/3342:3345 | No text annotation | ||
| J3_4V8P_068 | 1/B2/47:48, 1/B2/61:67, 1/B2/97:101 | No text annotation | homologous J3_8P9A_067 NA | |
| J3_4V8P_069 | 1/B3/9:14, 1/B3/65:66, 1/B3/109:110 | No text annotation | homologous J3_8P9A_066 NA | |
| J3_4V8P_070 | 1/C2/22:23, 1/D1/368:375, 1/D1/400:401 | No text annotation | geometric J3_5TBW_002 NA | |
| J3_4V8P_071 | 1/C2/22:23, 1/D1/368:378, 1/D1/389:401 | No text annotation | geometric J3_4WF9_011 NA | |
| J3_4V8P_072 | 1/C2/24:27, 1/D1/339:355, 1/D1/362:367 | No text annotation | geometric J3_5TBW_061 NA | |
| J3_4V8P_073 | 1/C2/47:48, 1/C2/61:67, 1/C2/97:101 | No text annotation | homologous J3_8P9A_067 NA | |
| J3_4V8P_074 | 1/C3/9:14, 1/C3/65:66, 1/C3/109:110 | No text annotation | homologous J3_8P9A_066 NA | |
| J3_4V8P_016 | 1/D1/111:121, 1/D1/149:158, 1/D1/262:266 | No text annotation | homologous J3_8C3A_001 NA | |
| J3_4V8P_075 | 1/D1/111:122, 1/D1/144:158, 1/D1/262:266 | No text annotation | ||
| J3_4V8P_076 | 1/D1/184:189, 1/D1/205:214, 1/D1/226:234 | No text annotation | ||
| J3_4V8P_017 | 1/D1/436:440, 1/D1/537:540, 1/D1/642:646 | No text annotation | ||
| J3_4V8P_018 | 1/D1/547:549, 1/D1/618:624, 1/D1/633:635 | No text annotation | ||
| J3_4V8P_019 | 1/D1/839:845, 1/D1/930:932, 1/D1/948:951 | No text annotation | homologous J3_5TBW_004 NA | |
| J3_4V8P_020 | 1/D1/854:856, 1/D1/888:892, 1/D1/917:920 | No text annotation | homologous J3_8C3A_004 NA | |
| J3_4V8P_077 | 1/D1/1012:1013, 1/D1/1088:1092, 1/D1/1120:1125 | No text annotation | ||
| J3_4V8P_021 | 1/D1/1505:1511, 1/D1/1881:1883, 1/D1/1895:1898 | No text annotation | homologous J3_5TBW_008 NA | |
| J3_4V8P_022 | 1/D1/1514:1517, 1/D1/1861:1867, 1/D1/1876:1878 | No text annotation | homologous J3_8C3A_007 NA | |
| J3_4V8P_078 | 1/D1/1552:1557, 1/D1/1616:1620, 1/D1/1637:1638 | No text annotation | homologous J3_8P9A_055 NA | |
| J3_4V8P_023 | 1/D1/1564:1567, 1/D1/1578:1585, 1/D1/1606:1608 | No text annotation | ||
| J3_4V8P_024 | 1/D1/1652:1656, 1/D1/1665:1673, 1/D1/1832:1842 | No text annotation | ||
| J3_4V8P_079 | 1/D1/1678:1682, 1/D1/1817:1818, 1/D1/1822:1827 | No text annotation | homologous J3_8C3A_055 NA | |
| J3_4V8P_025 | 1/D1/2427:2430, 1/D1/2507:2511, 1/D1/2580:2586 | No text annotation | geometric J3_4V9F_007 NA | |
| J3_4V8P_026 | 1/D1/2524:2527, 1/D1/2540:2553, 1/D1/2567:2570 | No text annotation | ||
| J3_4V8P_080 | 1/D1/2640:2642, 1/D1/2743:2754, 1/D1/2781:2786 | No text annotation | homologous J3_8C3A_056 NA | |
| J3_4V8P_027 | 1/D1/2653:2655, 1/D1/2679:2681, 1/D1/2690:2695 | No text annotation | homologous J3_8C3A_010 NA | |
| J3_4V8P_028 | 1/D1/2874:2877, 1/D1/2902:2904, 1/D1/2918:2924 | No text annotation | homologous J3_8P9A_063 NA | |
| J3_4V8P_110 | 1/D1/3153:3158, 1/D1/3180:3184, 1/D1/3225:3240 | No text annotation | ||
| J3_4V8P_082 | 1/D1/3259:3260, 1/D1/3274:3279, 1/D1/3342:3345 | No text annotation | ||
| J3_4V8P_083 | 1/E2/22:23, 1/F1/368:375, 1/F1/400:401 | No text annotation | geometric J3_8C3A_048 NA | |
| J3_4V8P_084 | 1/E2/22:23, 1/F1/368:378, 1/F1/389:401 | No text annotation | geometric J3_4WF9_011 NA | |
| J3_4V8P_085 | 1/E2/24:27, 1/F1/339:355, 1/F1/362:367 | No text annotation | geometric J3_5TBW_061 NA | |
| J3_4V8P_086 | 1/E2/47:48, 1/E2/61:67, 1/E2/97:101 | No text annotation | homologous J3_8P9A_067 NA | |
| J3_4V8P_087 | 1/E3/9:14, 1/E3/65:66, 1/E3/109:110 | No text annotation | homologous J3_8P9A_066 NA | |
| J3_4V8P_030 | 1/F1/111:121, 1/F1/149:158, 1/F1/262:266 | No text annotation | homologous J3_8C3A_001 NA | |
| J3_4V8P_088 | 1/F1/111:122, 1/F1/144:158, 1/F1/262:266 | No text annotation | ||
| J3_4V8P_089 | 1/F1/184:189, 1/F1/205:214, 1/F1/226:234 | No text annotation | ||
| J3_4V8P_031 | 1/F1/436:440, 1/F1/537:540, 1/F1/642:646 | No text annotation | ||
| J3_4V8P_032 | 1/F1/547:549, 1/F1/618:624, 1/F1/633:635 | No text annotation | ||
| J3_4V8P_033 | 1/F1/839:845, 1/F1/930:932, 1/F1/948:951 | No text annotation | homologous J3_5TBW_004 NA | |
| J3_4V8P_034 | 1/F1/854:856, 1/F1/888:892, 1/F1/917:920 | No text annotation | homologous J3_8C3A_004 NA | |
| J3_4V8P_090 | 1/F1/1012:1013, 1/F1/1088:1092, 1/F1/1120:1125 | No text annotation | ||
| J3_4V8P_035 | 1/F1/1505:1511, 1/F1/1881:1883, 1/F1/1895:1898 | No text annotation | homologous J3_5TBW_008 NA | |
| J3_4V8P_036 | 1/F1/1514:1517, 1/F1/1861:1867, 1/F1/1876:1878 | No text annotation | homologous J3_8C3A_007 NA | |
| J3_4V8P_091 | 1/F1/1552:1557, 1/F1/1616:1620, 1/F1/1637:1638 | No text annotation | homologous J3_8P9A_055 NA | |
| J3_4V8P_037 | 1/F1/1564:1567, 1/F1/1578:1585, 1/F1/1606:1608 | No text annotation | ||
| J3_4V8P_038 | 1/F1/1652:1656, 1/F1/1665:1673, 1/F1/1832:1842 | No text annotation | ||
| J3_4V8P_092 | 1/F1/1678:1682, 1/F1/1817:1818, 1/F1/1822:1827 | No text annotation | homologous J3_8C3A_055 NA | |
| J3_4V8P_039 | 1/F1/2427:2430, 1/F1/2507:2511, 1/F1/2580:2586 | No text annotation | geometric J3_4V9F_007 NA | |
| J3_4V8P_040 | 1/F1/2524:2527, 1/F1/2540:2553, 1/F1/2567:2570 | No text annotation | ||
| J3_4V8P_093 | 1/F1/2640:2642, 1/F1/2743:2754, 1/F1/2781:2786 | No text annotation | homologous J3_8C3A_056 NA | |
| J3_4V8P_041 | 1/F1/2653:2655, 1/F1/2679:2681, 1/F1/2690:2695 | No text annotation | homologous J3_8C3A_010 NA | |
| J3_4V8P_042 | 1/F1/2874:2877, 1/F1/2902:2904, 1/F1/2918:2924 | No text annotation | homologous J3_8P9A_063 NA | |
| J3_4V8P_111 | 1/F1/3153:3158, 1/F1/3180:3184, 1/F1/3225:3240 | No text annotation | ||
| J3_4V8P_095 | 1/F1/3259:3260, 1/F1/3274:3279, 1/F1/3342:3345 | No text annotation | ||
| J3_4V8P_096 | 1/G2/22:23, 1/H1/368:375, 1/H1/400:401 | No text annotation | geometric J3_8C3A_048 NA | |
| J3_4V8P_097 | 1/G2/22:23, 1/H1/368:378, 1/H1/389:401 | No text annotation | geometric J3_4WF9_011 NA | |
| J3_4V8P_098 | 1/G2/24:27, 1/H1/339:355, 1/H1/362:367 | No text annotation | geometric J3_5TBW_061 NA | |
| J3_4V8P_099 | 1/G2/47:48, 1/G2/61:67, 1/G2/97:101 | No text annotation | homologous J3_8P9A_067 NA | |
| J3_4V8P_100 | 1/G3/9:14, 1/G3/65:66, 1/G3/109:110 | No text annotation | homologous J3_8P9A_066 NA | |
| J3_4V8P_044 | 1/H1/111:121, 1/H1/149:158, 1/H1/262:266 | No text annotation | homologous J3_8C3A_001 NA | |
| J3_4V8P_101 | 1/H1/111:122, 1/H1/144:158, 1/H1/262:266 | No text annotation | ||
| J3_4V8P_102 | 1/H1/184:189, 1/H1/205:214, 1/H1/226:234 | No text annotation | ||
| J3_4V8P_045 | 1/H1/436:440, 1/H1/537:540, 1/H1/642:646 | No text annotation | ||
| J3_4V8P_046 | 1/H1/547:549, 1/H1/618:624, 1/H1/633:635 | No text annotation | ||
| J3_4V8P_047 | 1/H1/839:845, 1/H1/930:932, 1/H1/948:951 | No text annotation | homologous J3_5TBW_004 NA | |
| J3_4V8P_048 | 1/H1/854:856, 1/H1/888:892, 1/H1/917:920 | No text annotation | homologous J3_8C3A_004 NA | |
| J3_4V8P_103 | 1/H1/1012:1013, 1/H1/1088:1092, 1/H1/1120:1125 | No text annotation | ||
| J3_4V8P_049 | 1/H1/1505:1511, 1/H1/1881:1883, 1/H1/1895:1898 | No text annotation | homologous J3_5TBW_008 NA | |
| J3_4V8P_050 | 1/H1/1514:1517, 1/H1/1861:1867, 1/H1/1876:1878 | No text annotation | homologous J3_8C3A_007 NA | |
| J3_4V8P_104 | 1/H1/1552:1557, 1/H1/1616:1620, 1/H1/1637:1638 | No text annotation | homologous J3_8P9A_055 NA | |
| J3_4V8P_051 | 1/H1/1564:1567, 1/H1/1578:1585, 1/H1/1606:1608 | No text annotation | ||
| J3_4V8P_052 | 1/H1/1652:1656, 1/H1/1665:1673, 1/H1/1832:1842 | No text annotation | ||
| J3_4V8P_105 | 1/H1/1678:1682, 1/H1/1817:1818, 1/H1/1822:1827 | No text annotation | homologous J3_8C3A_055 NA | |
| J3_4V8P_053 | 1/H1/2427:2430, 1/H1/2507:2511, 1/H1/2580:2586 | No text annotation | geometric J3_4V9F_007 NA | |
| J3_4V8P_054 | 1/H1/2524:2527, 1/H1/2540:2553, 1/H1/2567:2570 | No text annotation | ||
| J3_4V8P_106 | 1/H1/2640:2642, 1/H1/2743:2754, 1/H1/2781:2786 | No text annotation | homologous J3_8C3A_056 NA | |
| J3_4V8P_055 | 1/H1/2653:2655, 1/H1/2679:2681, 1/H1/2690:2695 | No text annotation | homologous J3_8C3A_010 NA | |
| J3_4V8P_056 | 1/H1/2874:2877, 1/H1/2902:2904, 1/H1/2918:2924 | No text annotation | homologous J3_8P9A_063 NA | |
| J3_4V8P_112 | 1/H1/3153:3158, 1/H1/3180:3184, 1/H1/3225:3240 | No text annotation | ||
| J3_4V8P_108 | 1/H1/3259:3260, 1/H1/3274:3279, 1/H1/3342:3345 | No text annotation | ||
| J4_4V8P_001 | 1/A1/110:111, 1/A1/266:271, 1/A1/292:298, 1/A1/315:318 | No text annotation | homologous J4_8C3A_001 NA | |
| J4_4V8P_002 | 1/A1/184:189, 1/A1/205:208, 1/A1/212:214, 1/A1/226:234 | No text annotation | ||
| J4_4V8P_003 | 1/A1/1477:1483, 1/A1/1501:1502, 1/A1/1901:1904, 1/A1/2347:2348 | No text annotation | homologous J4_8P9A_014 NA | |
| J4_4V8P_004 | 1/A1/1518:1522, 1/A1/1546:1551, 1/A1/1639:1640, 1/A1/1853:1860 | No text annotation | ||
| J4_4V8P_005 | 1/A1/1521:1522, 1/A1/1546:1551, 1/A1/1639:1640, 1/A1/1853:1859 | No text annotation | ||
| J4_4V8P_006 | 1/A1/1698:1699, 1/A1/1717:1718, 1/A1/1777:1778, 1/A1/1798:1799 | No text annotation | homologous J4_8C3A_005 NA | |
| J4_4V8P_007 | 1/A1/2126:2130, 1/A1/2142:2146, 1/A1/2181:2185, 1/A1/2312:2317 | No text annotation | homologous J4_8C3A_006 NA | |
| J4_4V8P_008 | 1/A1/2187:2189, 1/A1/2243:2244, 1/A1/2262:2271, 1/A1/2305:2310 | No text annotation | homologous J4_8P9A_018 NA | |
| J4_4V8P_009 | 1/A1/2643:2647, 1/A1/2701:2705, 1/A1/2729:2731, 1/A1/2740:2742 | No text annotation | homologous J4_8P9A_019 NA | |
| J4_4V8P_010 | 1/A1/2999:3001, 1/A1/3031:3032, 1/A1/3087:3089, 1/A1/3123:3125 | No text annotation | homologous J4_8C3A_009 NA | |
| J4_4V8P_011 | 1/D1/110:111, 1/D1/266:271, 1/D1/292:298, 1/D1/315:318 | No text annotation | homologous J4_8C3A_001 NA | |
| J4_4V8P_012 | 1/D1/184:189, 1/D1/205:208, 1/D1/212:214, 1/D1/226:234 | No text annotation | ||
| J4_4V8P_013 | 1/D1/1477:1483, 1/D1/1501:1502, 1/D1/1901:1904, 1/D1/2347:2348 | No text annotation | homologous J4_8P9A_014 NA | |
| J4_4V8P_014 | 1/D1/1518:1522, 1/D1/1546:1551, 1/D1/1639:1640, 1/D1/1853:1860 | No text annotation | ||
| J4_4V8P_015 | 1/D1/1521:1522, 1/D1/1546:1551, 1/D1/1639:1640, 1/D1/1853:1859 | No text annotation | ||
| J4_4V8P_016 | 1/D1/1698:1699, 1/D1/1717:1718, 1/D1/1777:1778, 1/D1/1798:1799 | No text annotation | homologous J4_8C3A_005 NA | |
| J4_4V8P_017 | 1/D1/2126:2130, 1/D1/2142:2146, 1/D1/2181:2185, 1/D1/2312:2317 | No text annotation | homologous J4_8C3A_006 NA | |
| J4_4V8P_018 | 1/D1/2187:2189, 1/D1/2243:2244, 1/D1/2262:2271, 1/D1/2305:2310 | No text annotation | homologous J4_8P9A_018 NA | |
| J4_4V8P_019 | 1/D1/2643:2647, 1/D1/2701:2705, 1/D1/2729:2731, 1/D1/2740:2742 | No text annotation | homologous J4_8P9A_019 NA | |
| J4_4V8P_020 | 1/D1/2999:3001, 1/D1/3031:3032, 1/D1/3087:3089, 1/D1/3123:3125 | No text annotation | homologous J4_8P9A_020 NA | |
| J4_4V8P_021 | 1/F1/110:111, 1/F1/266:271, 1/F1/292:298, 1/F1/315:318 | No text annotation | homologous J4_8C3A_001 NA | |
| J4_4V8P_022 | 1/F1/184:189, 1/F1/205:208, 1/F1/212:214, 1/F1/226:234 | No text annotation | ||
| J4_4V8P_023 | 1/F1/1477:1483, 1/F1/1501:1502, 1/F1/1901:1904, 1/F1/2347:2348 | No text annotation | homologous J4_8P9A_014 NA | |
| J4_4V8P_024 | 1/F1/1518:1522, 1/F1/1546:1551, 1/F1/1639:1640, 1/F1/1853:1860 | No text annotation | ||
| J4_4V8P_025 | 1/F1/1521:1522, 1/F1/1546:1551, 1/F1/1639:1640, 1/F1/1853:1859 | No text annotation | ||
| J4_4V8P_026 | 1/F1/1698:1699, 1/F1/1717:1718, 1/F1/1777:1778, 1/F1/1798:1799 | No text annotation | homologous J4_8C3A_005 NA | |
| J4_4V8P_027 | 1/F1/2126:2130, 1/F1/2142:2146, 1/F1/2181:2185, 1/F1/2312:2317 | No text annotation | homologous J4_8C3A_006 NA | |
| J4_4V8P_028 | 1/F1/2187:2189, 1/F1/2243:2244, 1/F1/2262:2271, 1/F1/2305:2310 | No text annotation | homologous J4_8P9A_018 NA | |
| J4_4V8P_029 | 1/F1/2643:2647, 1/F1/2701:2705, 1/F1/2729:2731, 1/F1/2740:2742 | No text annotation | homologous J4_8P9A_019 NA | |
| J4_4V8P_030 | 1/F1/2999:3001, 1/F1/3031:3032, 1/F1/3087:3089, 1/F1/3123:3125 | No text annotation | homologous J4_8C3A_009 NA | |
| J4_4V8P_031 | 1/H1/110:111, 1/H1/266:271, 1/H1/292:298, 1/H1/315:318 | No text annotation | homologous J4_8C3A_001 NA | |
| J4_4V8P_032 | 1/H1/184:189, 1/H1/205:208, 1/H1/212:214, 1/H1/226:234 | No text annotation | ||
| J4_4V8P_033 | 1/H1/1477:1483, 1/H1/1501:1502, 1/H1/1901:1904, 1/H1/2347:2348 | No text annotation | homologous J4_8P9A_014 NA | |
| J4_4V8P_034 | 1/H1/1518:1522, 1/H1/1546:1551, 1/H1/1639:1640, 1/H1/1853:1860 | No text annotation | ||
| J4_4V8P_035 | 1/H1/1521:1522, 1/H1/1546:1551, 1/H1/1639:1640, 1/H1/1853:1859 | No text annotation | ||
| J4_4V8P_036 | 1/H1/1698:1699, 1/H1/1717:1718, 1/H1/1777:1778, 1/H1/1798:1799 | No text annotation | homologous J4_8C3A_005 NA | |
| J4_4V8P_037 | 1/H1/2126:2130, 1/H1/2142:2146, 1/H1/2181:2185, 1/H1/2312:2317 | No text annotation | homologous J4_8C3A_006 NA | |
| J4_4V8P_041 | 1/H1/2187:2189, 1/H1/2243:2244, 1/H1/2262:2271, 1/H1/2305:2310 | No text annotation | ||
| J4_4V8P_039 | 1/H1/2643:2647, 1/H1/2701:2705, 1/H1/2729:2731, 1/H1/2740:2742 | No text annotation | homologous J4_8P9A_019 NA | |
| J4_4V8P_040 | 1/H1/2999:3001, 1/H1/3031:3032, 1/H1/3087:3089, 1/H1/3123:3125 | No text annotation | homologous J4_8C3A_009 NA | |
| J5_4V8P_001 | 1/A1/18:20, 1/B2/38:45, 1/B2/103:108, 1/B2/116:117, 1/B2/134:136 | No text annotation | homologous J5_8P9A_010 NA | |
| J5_4V8P_002 | 1/A1/682:687, 1/A1/824:827, 1/A1/966:969, 1/A1/1402:1403, 1/A1/1457:1463 | No text annotation | homologous J5_8P9A_011 NA | |
| J5_4V8P_003 | 1/A1/699:702, 1/A1/727:731, 1/A1/738:747, 1/A1/773:775, 1/A1/807:812 | No text annotation | ||
| J5_4V8P_004 | 1/A1/1930:1938, 1/A1/1962:1963, 1/A1/2105:2106, 1/A1/2110:2118, 1/A1/2326:2328 | No text annotation | homologous J5_8P9A_013 NA | |
| J5_4V8P_005 | 1/A1/2394:2401, 1/A1/2803:2811, 1/A1/2855:2864, 1/A1/2939:2945, 1/A1/2963:2968 | No text annotation | ||
| J5_4V8P_006 | 1/A1/2411:2414, 1/A1/2600:2603, 1/A1/2616:2617, 1/A1/2639:2640, 1/A1/2786:2792 | No text annotation | homologous J5_8P9A_015 NA | |
| J5_4V8P_007 | 1/C2/38:45, 1/C2/103:108, 1/C2/116:117, 1/C2/134:136, 1/D1/18:20 | No text annotation | ||
| J5_4V8P_008 | 1/D1/682:687, 1/D1/824:827, 1/D1/966:969, 1/D1/1402:1403, 1/D1/1457:1463 | No text annotation | homologous J5_8P9A_011 NA | |
| J5_4V8P_009 | 1/D1/699:702, 1/D1/727:731, 1/D1/738:747, 1/D1/773:775, 1/D1/807:812 | No text annotation | ||
| J5_4V8P_010 | 1/D1/1930:1938, 1/D1/1962:1963, 1/D1/2105:2106, 1/D1/2110:2118, 1/D1/2326:2328 | No text annotation | homologous J5_8P9A_013 NA | |
| J5_4V8P_011 | 1/D1/2394:2401, 1/D1/2803:2811, 1/D1/2855:2864, 1/D1/2939:2945, 1/D1/2963:2968 | No text annotation | ||
| J5_4V8P_012 | 1/D1/2411:2414, 1/D1/2600:2603, 1/D1/2616:2617, 1/D1/2639:2640, 1/D1/2786:2792 | No text annotation | homologous J5_8P9A_015 NA | |
| J5_4V8P_013 | 1/E2/38:45, 1/E2/103:108, 1/E2/116:117, 1/E2/134:136, 1/F1/18:20 | No text annotation | ||
| J5_4V8P_014 | 1/F1/682:687, 1/F1/824:827, 1/F1/966:969, 1/F1/1402:1403, 1/F1/1457:1463 | No text annotation | homologous J5_8P9A_011 NA | |
| J5_4V8P_015 | 1/F1/699:702, 1/F1/727:731, 1/F1/738:747, 1/F1/773:775, 1/F1/807:812 | No text annotation | ||
| J5_4V8P_016 | 1/F1/1930:1938, 1/F1/1962:1963, 1/F1/2105:2106, 1/F1/2110:2118, 1/F1/2326:2328 | No text annotation | homologous J5_8P9A_013 NA | |
| J5_4V8P_017 | 1/F1/2394:2401, 1/F1/2803:2811, 1/F1/2855:2864, 1/F1/2939:2945, 1/F1/2963:2968 | No text annotation | ||
| J5_4V8P_018 | 1/F1/2411:2414, 1/F1/2600:2603, 1/F1/2616:2617, 1/F1/2639:2640, 1/F1/2786:2792 | No text annotation | homologous J5_8P9A_015 NA | |
| J5_4V8P_019 | 1/G2/38:45, 1/G2/103:108, 1/G2/116:117, 1/G2/134:136, 1/H1/18:20 | No text annotation | ||
| J5_4V8P_020 | 1/H1/682:687, 1/H1/824:827, 1/H1/966:969, 1/H1/1402:1403, 1/H1/1457:1463 | No text annotation | homologous J5_8P9A_011 NA | |
| J5_4V8P_021 | 1/H1/699:702, 1/H1/727:731, 1/H1/738:747, 1/H1/773:775, 1/H1/807:812 | No text annotation | ||
| J5_4V8P_022 | 1/H1/1930:1938, 1/H1/1962:1963, 1/H1/2105:2106, 1/H1/2110:2118, 1/H1/2326:2328 | No text annotation | homologous J5_8P9A_013 NA | |
| J5_4V8P_023 | 1/H1/2394:2401, 1/H1/2803:2811, 1/H1/2855:2864, 1/H1/2939:2945, 1/H1/2963:2968 | No text annotation | ||
| J5_4V8P_024 | 1/H1/2411:2414, 1/H1/2600:2603, 1/H1/2616:2617, 1/H1/2639:2640, 1/H1/2786:2792 | No text annotation | homologous J5_8P9A_015 NA | |
| J6_4V8P_001 | 1/A1/20:25, 1/A1/56:66, 1/A1/73:77, 1/A1/104:108, 1/A1/320:329, 1/B2/36:38 | No text annotation | ||
| J6_4V8P_002 | 1/A1/2411:2414, 1/A1/2600:2603, 1/A1/2616:2617, 1/A1/2639:2642, 1/A1/2743:2754, 1/A1/2781:2792 | No text annotation | ||
| J6_4V8P_003 | 1/C2/36:38, 1/D1/20:25, 1/D1/56:66, 1/D1/73:77, 1/D1/104:108, 1/D1/320:329 | No text annotation | ||
| J6_4V8P_004 | 1/D1/2411:2414, 1/D1/2600:2603, 1/D1/2616:2617, 1/D1/2639:2642, 1/D1/2743:2754, 1/D1/2781:2792 | No text annotation | ||
| J6_4V8P_005 | 1/E2/36:38, 1/F1/20:25, 1/F1/56:66, 1/F1/73:77, 1/F1/104:108, 1/F1/320:329 | No text annotation | ||
| J6_4V8P_006 | 1/F1/2411:2414, 1/F1/2600:2603, 1/F1/2616:2617, 1/F1/2639:2642, 1/F1/2743:2754, 1/F1/2781:2792 | No text annotation | ||
| J6_4V8P_007 | 1/G2/36:38, 1/H1/20:25, 1/H1/56:66, 1/H1/73:77, 1/H1/104:108, 1/H1/320:329 | No text annotation | ||
| J6_4V8P_008 | 1/H1/2411:2414, 1/H1/2600:2603, 1/H1/2616:2617, 1/H1/2639:2642, 1/H1/2743:2754, 1/H1/2781:2792 | No text annotation | ||
| J7_4V8P_001 | 1/A1/974:979, 1/A1/992:993, 1/A1/1141:1144, 1/A1/1168:1173, 1/A1/1184:1188, 1/A1/1365:1366, 1/A1/1392:1397 | No text annotation | ||
| J7_4V8P_002 | 1/D1/974:979, 1/D1/992:993, 1/D1/1141:1144, 1/D1/1168:1173, 1/D1/1184:1188, 1/D1/1365:1366, 1/D1/1392:1397 | No text annotation | ||
| J7_4V8P_003 | 1/F1/974:979, 1/F1/992:993, 1/F1/1141:1144, 1/F1/1168:1173, 1/F1/1184:1188, 1/F1/1365:1366, 1/F1/1392:1397 | No text annotation | ||
| J7_4V8P_004 | 1/H1/974:979, 1/H1/992:993, 1/H1/1141:1144, 1/H1/1168:1173, 1/H1/1184:1188, 1/H1/1365:1366, 1/H1/1392:1397 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J3_4V8P_066 | No text annotation | ||
| J3_4V8P_014 | No text annotation | ||
| J3_4V8P_015 | No text annotation | ||
| J3_4V8P_081 | No text annotation | ||
| J3_4V8P_029 | No text annotation | ||
| J3_4V8P_094 | No text annotation | ||
| J3_4V8P_043 | No text annotation | ||
| J3_4V8P_107 | No text annotation | ||
| J4_4V8P_038 | No text annotation |
Coloring options: