HL_4V8T_055
3D structure
- PDB id
- 4V8T (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of the 60S Ribosomal Subunit in Complex with Arx1 and Rei1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 8.1 Å
Loop
- Sequence
- CUGGGGCGG
- Length
- 9 nucleotides
- Bulged bases
- 4V8T|1|5|G|2618
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V8T_055 not in the Motif Atlas
- Homologous match to HL_5TBW_054
- Geometric discrepancy: 0.0802
- The information below is about HL_5TBW_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_47383.2
- Basepair signature
- cWW-F-F-cWW-F-F
- Number of instances in this motif group
- 11
Unit IDs
4V8T|1|5|C|2616
4V8T|1|5|U|2617
4V8T|1|5|G|2618
4V8T|1|5|G|2619
4V8T|1|5|G|2620
4V8T|1|5|G|2621
4V8T|1|5|C|2622
4V8T|1|5|G|2623
4V8T|1|5|G|2624
Current chains
- Chain 5
- 25S RIBOSOMAL RNA
Nearby chains
- Chain I
- 60S RIBOSOMAL PROTEIN L10
- Chain b
- 60S RIBOSOMAL PROTEIN L29
Coloring options: