3D structure

PDB id
4V8T (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM Structure of the 60S Ribosomal Subunit in Complex with Arx1 and Rei1
Experimental method
ELECTRON MICROSCOPY
Resolution
8.1 Å

Loop

Sequence
AUUCAUUU
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V8T|1|5|A|2536
4V8T|1|5|U|2537
4V8T|1|5|U|2538
4V8T|1|5|C|2539
4V8T|1|5|A|2540
4V8T|1|5|U|2541
4V8T|1|5|U|2542
4V8T|1|5|U|2543

Current chains

Chain 5
25S RIBOSOMAL RNA

Nearby chains

No other chains within 10Å

Coloring options:

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