HL_4V8U_230

3D structure

PDB id

4V8U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

CCUACGGG

Length

8 nucleotides

Bulged bases

4V8U|1|CA|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V8U_230 not in the Motif Atlas

Geometric match to HL_7MLW_004

Geometric discrepancy: 0.2802

The information below is about HL_7MLW_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_83003.1

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

6

Unit IDs

4V8U|1|CA|C|341
4V8U|1|CA|C|342
4V8U|1|CA|U|343
4V8U|1|CA|A|344
4V8U|1|CA|C|345
4V8U|1|CA|G|346
4V8U|1|CA|G|347
4V8U|1|CA|G|348

Current chains

Chain CA

16S RIBOSOMAL RNA

Nearby chains

Chain CT

30S RIBOSOMAL PROTEIN S20

Chain DO

50S RIBOSOMAL PROTEIN L14

Chain DT

50S RIBOSOMAL PROTEIN L19