HL_4V8Y_007

3D structure

PDB id

4V8Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation Complex

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

CUUG

Length

4 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V8Y_007 not in the Motif Atlas

Geometric match to HL_6JOO_002

Geometric discrepancy: 0.2769

The information below is about HL_6JOO_002

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.3

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

4V8Y|1|B2|C|276
4V8Y|1|B2|U|277
4V8Y|1|B2|U|278
4V8Y|1|B2|G|279

Current chains

Chain B2

18S RIBOSOMAL RNA

Nearby chains

Chain BW

60S RIBOSOMAL PROTEIN L24-A