HL_4V8Z_013

3D structure

PDB id

4V8Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation Complex

Experimental method

ELECTRON MICROSCOPY

Resolution

6.6 Å

Loop

Sequence

GGCCCAUUCGGGUC

Length

14 nucleotides

Bulged bases

4V8Z|1|B2|C|495

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8Z|1|B2|G|487
4V8Z|1|B2|G|488
4V8Z|1|B2|C|489
4V8Z|1|B2|C|490
4V8Z|1|B2|C|491
4V8Z|1|B2|A|492
4V8Z|1|B2|U|493
4V8Z|1|B2|U|494
4V8Z|1|B2|C|495
4V8Z|1|B2|G|496
4V8Z|1|B2|G|497
4V8Z|1|B2|G|498
4V8Z|1|B2|U|499
4V8Z|1|B2|C|500

Current chains

Chain B2

18S RIBOSOMAL RNA

Nearby chains

Chain A4

40S RIBOSOMAL PROTEIN S30-A