HL_4V8Z_089

3D structure

PDB id

4V8Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation Complex

Experimental method

ELECTRON MICROSCOPY

Resolution

6.6 Å

Loop

Sequence

GAAUUCAUUUUC

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8Z|1|B5|G|2534
4V8Z|1|B5|A|2535
4V8Z|1|B5|A|2536
4V8Z|1|B5|U|2537
4V8Z|1|B5|U|2538
4V8Z|1|B5|C|2539
4V8Z|1|B5|A|2540
4V8Z|1|B5|U|2541
4V8Z|1|B5|U|2542
4V8Z|1|B5|U|2543
4V8Z|1|B5|U|2544
4V8Z|1|B5|C|2545

Current chains

Chain B5

25S RIBOSOMAL RNA

Nearby chains

Chain AB

40S RIBOSOMAL PROTEIN S1-A

Chain BG

60S RIBOSOMAL PROTEIN L8-A