HL_4V90_073

3D structure

PDB id

4V90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

CCGUACGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V90_073 not in the Motif Atlas

Geometric match to HL_2Y9H_005

Geometric discrepancy: 0.2989

The information below is about HL_2Y9H_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_86870.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

4V90|1|BA|C|1531
4V90|1|BA|C|1532
4V90|1|BA|G|1533
4V90|1|BA|U|1534
4V90|1|BA|A|1535
4V90|1|BA|C|1536
4V90|1|BA|G|1537
4V90|1|BA|G|1538

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains