HL_4V90_102

3D structure

PDB id

4V90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

GGCGUCAAGCC

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V90_102 not in the Motif Atlas

Geometric match to HL_2ZZN_004

Geometric discrepancy: 0.2939

The information below is about HL_2ZZN_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_09452.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

3

Unit IDs

4V90|1|BA|G|2792
4V90|1|BA|G|2793
4V90|1|BA|C|2794
4V90|1|BA|G|2795
4V90|1|BA|U|2796
4V90|1|BA|C|2799
4V90|1|BA|A|2801
4V90|1|BA|A|2801|||A
4V90|1|BA|G|2802
4V90|1|BA|C|2803
4V90|1|BA|C|2804

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains