HL_4V91_014

3D structure

PDB id

4V91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UCUUGAAACA

Length

10 nucleotides

Bulged bases

4V91|1|1|C|648

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_73671.1

Basepair signature

cWW-R-R-tWH-R-R-R

Number of instances in this motif group

117

Unit IDs

4V91|1|1|U|640
4V91|1|1|C|641
4V91|1|1|U|642
4V91|1|1|U|643
4V91|1|1|G|644
4V91|1|1|A|645
4V91|1|1|A|646
4V91|1|1|A|647
4V91|1|1|C|648
4V91|1|1|A|649

Current chains

Chain 1

25S RRNA

Nearby chains

Chain B

UL3

Chain a

UL15

Chain e

EL32