HL_4V91_015

3D structure

PDB id

4V91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUGUAAAAC

Length

9 nucleotides

Bulged bases

4V91|1|1|U|689, 4V91|1|1|A|691

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_24456.1

Basepair signature

cWW-cSW-tSH-R

Number of instances in this motif group

2

Unit IDs

4V91|1|1|G|686
4V91|1|1|U|687
4V91|1|1|G|688
4V91|1|1|U|689
4V91|1|1|A|690
4V91|1|1|A|691
4V91|1|1|A|692
4V91|1|1|A|693
4V91|1|1|C|694

Current chains

Chain 1

25S RRNA

Nearby chains

Chain 4

5.8S ribosomal RNA; 5.8S rRNA

Chain C

UL4

Chain L

EL13

Chain N

EL15

Chain Y

UL24