HL_4V91_020

3D structure

PDB id

4V91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

ACGUGCAAAU

Length

10 nucleotides

Bulged bases

4V91|1|1|U|879, 4V91|1|1|A|883

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_01306.1

Basepair signature

cWW-R-tSW-R-R

Number of instances in this motif group

10

Unit IDs

4V91|1|1|A|876
4V91|1|1|C|877
4V91|1|1|G|878
4V91|1|1|U|879
4V91|1|1|G|880
4V91|1|1|C|881
4V91|1|1|A|882
4V91|1|1|A|883
4V91|1|1|A|884
4V91|1|1|U|885

Current chains

Chain 1

25S RRNA

Nearby chains

Chain B

UL3

Chain P

UL22

Chain j

EL37