HL_4V92_010
3D structure
- PDB id
- 4V92 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CCUGAGAAACGG
- Length
- 12 nucleotides
- Bulged bases
- 4V92|1|A2|G|403
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V92_010 not in the Motif Atlas
- Homologous match to HL_4V88_195
- Geometric discrepancy: 0.1856
- The information below is about HL_4V88_195
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06226.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
4V92|1|A2|C|393
4V92|1|A2|C|394
4V92|1|A2|U|395
4V92|1|A2|G|396
4V92|1|A2|A|397
4V92|1|A2|G|398
4V92|1|A2|A|399
4V92|1|A2|A|400
4V92|1|A2|A|401
4V92|1|A2|C|402
4V92|1|A2|G|403
4V92|1|A2|G|404
Current chains
- Chain A2
- 18S RRNA
Nearby chains
- Chain BE
- ES4
- Chain BG
- ES6
- Chain BI
- ES8
- Chain BY
- ES24
Coloring options: