HL_4V92_039

3D structure

PDB id

4V92 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UAUUUA

Length

6 nucleotides

Bulged bases

4V92|1|AZ|A|6106, 4V92|1|AZ|U|6107, 4V92|1|AZ|U|6109

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_94809.1

Basepair signature

cWW

Number of instances in this motif group

6

Unit IDs

4V92|1|AZ|U|6105
4V92|1|AZ|A|6106
4V92|1|AZ|U|6107
4V92|1|AZ|U|6108
4V92|1|AZ|U|6109
4V92|1|AZ|A|6110

Current chains

Chain AZ

RNA OF CRICKET-PARALYSIS-VIRUS-IRES

Nearby chains

Chain BF

US7

Chain BO

US11

Chain Bc

ES28