Motif HL_94809.1 Version HL_94809.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 1-3 | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_5IT9_038 | 5IT9 | 0.4574 | 3 | i | CrPV IRES | U | 6110 | U | 6113 | A | 6115 | cWW |
| 2 | HL_4V92_039 | 4V92 | 0.4676 | 3 | AZ | CrPV IRES | U | 6105 | U | 6108 | A | 6110 | cWW |
| 3 | HL_4V91_069 | 4V91 | 0.2833 | 1 | 1 | LSU rRNA | C | 3194 | U | 3196 | G | 3197 | cWW |
| 4 | HL_5J7L_176 | 5J7L | 0.0000 | 1 | DA | LSU rRNA | C | 1728 | C | 1730 | G | 1731 | ncWW |
| 5 | HL_4V4Q_105 | 4V4Q | 0.4082 | 1 | CA | SSU rRNA | C | 83 | U | 85 | G | 86 | cWW |
| 6 | HL_5A2Q_034 | 5A2Q | 0.4590 | 1 | 3 | IRES | C | 232 | U | 234 | G | 235 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAUUUA | 2 |
| CUUG | 2 |
| CUCG | 1 |
| CGUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUUU | 2 |
| UU | 2 |
| UC | 1 |
| GU | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
Coloring options: